Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC9.72□□□□□ -0.85
Hoxd3P09027 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC9.72□□□□□ -0.85
Hoxd3P09027 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC9.72□□□□□ -0.85
Hoxd3P09027 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC9.72□□□□□ -0.85
Hoxd3P09027 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC9.72□□□□□ -0.85
Hoxd3P09027 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Hoxd3P09027 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC9.72□□□□□ -0.85
Hoxd3P09027 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC9.72□□□□□ -0.85
Hoxd3P09027 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Hoxd3P09027 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC9.72□□□□□ -0.85
Hoxd3P09027 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Hoxd3P09027 AC133598.4-201ENSMUST00000224577 454 ntBASIC9.72□□□□□ -0.85
Hoxd3P09027 AC140368.1-202ENSMUST00000226131 658 ntBASIC9.72□□□□□ -0.85
Hoxd3P09027 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hoxd3P09027 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hoxd3P09027 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Hoxd3P09027 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Hoxd3P09027 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Hoxd3P09027 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hoxd3P09027 Gm27196-201ENSMUST00000184787 2582 ntBASIC9.72□□□□□ -0.85
Hoxd3P09027 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Hoxd3P09027 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Hoxd3P09027 Gm8862-201ENSMUST00000198379 1346 ntBASIC9.72□□□□□ -0.85
Hoxd3P09027 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC9.72□□□□□ -0.85
Hoxd3P09027 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hoxd3P09027 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hoxd3P09027 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hoxd3P09027 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Hoxd3P09027 Gm20541-201ENSMUST00000173035 1406 ntBASIC9.72□□□□□ -0.85
Hoxd3P09027 Mbnl2-204ENSMUST00000227012 2390 ntBASIC9.72□□□□□ -0.85
Hoxd3P09027 Gm42822-201ENSMUST00000200507 1529 ntBASIC9.72□□□□□ -0.85
Hoxd3P09027 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC9.72□□□□□ -0.85
Hoxd3P09027 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hoxd3P09027 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hoxd3P09027 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hoxd3P09027 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Hoxd3P09027 Kcnk16-202ENSMUST00000225596 2127 ntBASIC9.71□□□□□ -0.85
Hoxd3P09027 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hoxd3P09027 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hoxd3P09027 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hoxd3P09027 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.85
Hoxd3P09027 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Hoxd3P09027 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hoxd3P09027 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Hoxd3P09027 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hoxd3P09027 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hoxd3P09027 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC9.71□□□□□ -0.85
Hoxd3P09027 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hoxd3P09027 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hoxd3P09027 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hoxd3P09027 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Hoxd3P09027 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Hoxd3P09027 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hoxd3P09027 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Hoxd3P09027 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hoxd3P09027 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hoxd3P09027 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hoxd3P09027 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hoxd3P09027 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hoxd3P09027 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Hoxd3P09027 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hoxd3P09027 Gm15236-201ENSMUST00000117309 379 ntBASIC9.71□□□□□ -0.86
Hoxd3P09027 Gm15937-201ENSMUST00000120727 1235 ntBASIC9.71□□□□□ -0.86
Hoxd3P09027 Gm12749-201ENSMUST00000122138 1159 ntBASIC9.71□□□□□ -0.86
Hoxd3P09027 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hoxd3P09027 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hoxd3P09027 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC9.71□□□□□ -0.86
Hoxd3P09027 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC9.71□□□□□ -0.86
Hoxd3P09027 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hoxd3P09027 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hoxd3P09027 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Hoxd3P09027 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC9.71□□□□□ -0.86
Hoxd3P09027 Gm45074-201ENSMUST00000209091 1240 ntBASIC9.71□□□□□ -0.86
Hoxd3P09027 Gm44582-201ENSMUST00000209125 445 ntBASIC9.71□□□□□ -0.86
Hoxd3P09027 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC9.71□□□□□ -0.86
Hoxd3P09027 AC153544.1-201ENSMUST00000217988 400 ntBASIC9.71□□□□□ -0.86
Hoxd3P09027 Gm9176-201ENSMUST00000219955 1120 ntBASIC9.71□□□□□ -0.86
Hoxd3P09027 Gm18615-201ENSMUST00000222919 1031 ntBASIC9.71□□□□□ -0.86
Hoxd3P09027 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hoxd3P09027 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Hoxd3P09027 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hoxd3P09027 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Hoxd3P09027 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hoxd3P09027 AC160863.4-201ENSMUST00000218099 1334 ntTSL 5 BASIC9.71□□□□□ -0.86
Hoxd3P09027 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC9.71□□□□□ -0.86
Hoxd3P09027 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hoxd3P09027 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hoxd3P09027 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hoxd3P09027 Gm10782-202ENSMUST00000223775 1480 ntBASIC9.71□□□□□ -0.86
Hoxd3P09027 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hoxd3P09027 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC9.71□□□□□ -0.86
Hoxd3P09027 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hoxd3P09027 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hoxd3P09027 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC9.71□□□□□ -0.86
Hoxd3P09027 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hoxd3P09027 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hoxd3P09027 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Hoxd3P09027 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.71□□□□□ -0.86
Hoxd3P09027 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Hoxd3P09027 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms