Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.24□□□□□ -0.29
Vti1aO89116 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Vti1aO89116 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1aO89116 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.24□□□□□ -0.29
Vti1aO89116 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Vti1aO89116 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1aO89116 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1aO89116 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1aO89116 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.24□□□□□ -0.29
Vti1aO89116 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1aO89116 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1aO89116 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.24□□□□□ -0.29
Vti1aO89116 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1aO89116 Gm14832-201ENSMUST00000121289 322 ntBASIC13.24□□□□□ -0.29
Vti1aO89116 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.24□□□□□ -0.29
Vti1aO89116 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.24□□□□□ -0.29
Vti1aO89116 Gm25732-201ENSMUST00000175168 60 ntBASIC13.24□□□□□ -0.29
Vti1aO89116 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Vti1aO89116 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.24□□□□□ -0.29
Vti1aO89116 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.24□□□□□ -0.29
Vti1aO89116 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.24□□□□□ -0.29
Vti1aO89116 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1aO89116 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.24□□□□□ -0.29
Vti1aO89116 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1aO89116 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1aO89116 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.24□□□□□ -0.29
Vti1aO89116 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1aO89116 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1aO89116 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.24□□□□□ -0.29
Vti1aO89116 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1aO89116 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1aO89116 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vti1aO89116 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1aO89116 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Vti1aO89116 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1aO89116 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1aO89116 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1aO89116 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1aO89116 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Vti1aO89116 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1aO89116 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1aO89116 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1aO89116 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1aO89116 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1aO89116 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Vti1aO89116 Gm13611-201ENSMUST00000118269 318 ntBASIC13.23□□□□□ -0.29
Vti1aO89116 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Vti1aO89116 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1aO89116 Gm24845-201ENSMUST00000158034 109 ntBASIC13.23□□□□□ -0.29
Vti1aO89116 Gm20426-201ENSMUST00000173657 440 ntBASIC13.23□□□□□ -0.29
Vti1aO89116 Gm29615-201ENSMUST00000185371 697 ntBASIC13.23□□□□□ -0.29
Vti1aO89116 Gm28224-201ENSMUST00000186078 697 ntBASIC13.23□□□□□ -0.29
Vti1aO89116 Gm29001-201ENSMUST00000186177 697 ntBASIC13.23□□□□□ -0.29
Vti1aO89116 Gm28292-201ENSMUST00000186593 697 ntBASIC13.23□□□□□ -0.29
Vti1aO89116 Gm28101-201ENSMUST00000187608 697 ntBASIC13.23□□□□□ -0.29
Vti1aO89116 Gm29076-201ENSMUST00000187689 697 ntBASIC13.23□□□□□ -0.29
Vti1aO89116 Gm28302-201ENSMUST00000187931 697 ntBASIC13.23□□□□□ -0.29
Vti1aO89116 Gm28646-201ENSMUST00000188220 697 ntBASIC13.23□□□□□ -0.29
Vti1aO89116 Gm28205-201ENSMUST00000189177 697 ntBASIC13.23□□□□□ -0.29
Vti1aO89116 Gm29032-201ENSMUST00000189797 697 ntBASIC13.23□□□□□ -0.29
Vti1aO89116 Gm28695-201ENSMUST00000190300 697 ntBASIC13.23□□□□□ -0.29
Vti1aO89116 Gm37448-201ENSMUST00000192795 697 ntBASIC13.23□□□□□ -0.29
Vti1aO89116 Gm44124-201ENSMUST00000204159 472 ntBASIC13.23□□□□□ -0.29
Vti1aO89116 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1aO89116 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1aO89116 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1aO89116 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1aO89116 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1aO89116 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1aO89116 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1aO89116 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1aO89116 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1aO89116 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Vti1aO89116 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
Vti1aO89116 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vti1aO89116 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1aO89116 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.22□□□□□ -0.29
Vti1aO89116 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1aO89116 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1aO89116 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1aO89116 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1aO89116 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1aO89116 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1aO89116 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.22□□□□□ -0.29
Vti1aO89116 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1aO89116 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Vti1aO89116 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Vti1aO89116 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.22□□□□□ -0.29
Vti1aO89116 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Vti1aO89116 Gm12266-201ENSMUST00000120311 962 ntBASIC13.22□□□□□ -0.29
Vti1aO89116 Gm13315-201ENSMUST00000120376 991 ntBASIC13.22□□□□□ -0.29
Vti1aO89116 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1aO89116 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1aO89116 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.22□□□□□ -0.29
Vti1aO89116 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.22□□□□□ -0.29
Vti1aO89116 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1aO89116 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.22□□□□□ -0.29
Vti1aO89116 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Vti1aO89116 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vti1aO89116 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms