Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcnkO88874 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CcnkO88874 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CcnkO88874 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcnkO88874 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.94□□□□□ -0.66
CcnkO88874 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
CcnkO88874 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
CcnkO88874 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
CcnkO88874 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.94□□□□□ -0.66
CcnkO88874 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcnkO88874 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcnkO88874 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.94□□□□□ -0.66
CcnkO88874 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.94□□□□□ -0.66
CcnkO88874 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.94□□□□□ -0.66
CcnkO88874 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcnkO88874 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcnkO88874 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
CcnkO88874 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CcnkO88874 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CcnkO88874 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcnkO88874 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CcnkO88874 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CcnkO88874 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcnkO88874 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CcnkO88874 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcnkO88874 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
CcnkO88874 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcnkO88874 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcnkO88874 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcnkO88874 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
CcnkO88874 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcnkO88874 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcnkO88874 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CcnkO88874 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
CcnkO88874 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.94□□□□□ -0.66
CcnkO88874 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
CcnkO88874 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
CcnkO88874 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.93□□□□□ -0.66
CcnkO88874 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.93□□□□□ -0.66
CcnkO88874 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
CcnkO88874 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.93□□□□□ -0.66
CcnkO88874 Gm12138-201ENSMUST00000122180 951 ntBASIC10.93□□□□□ -0.66
CcnkO88874 Mir1938-201ENSMUST00000158746 100 ntBASIC10.93□□□□□ -0.66
CcnkO88874 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC10.93□□□□□ -0.66
CcnkO88874 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.93□□□□□ -0.66
CcnkO88874 Gm37922-201ENSMUST00000195596 455 ntBASIC10.93□□□□□ -0.66
CcnkO88874 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.93□□□□□ -0.66
CcnkO88874 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.93□□□□□ -0.66
CcnkO88874 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 Gm9899-201ENSMUST00000065519 555 ntBASIC10.93□□□□□ -0.66
CcnkO88874 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.93□□□□□ -0.66
CcnkO88874 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
CcnkO88874 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.93□□□□□ -0.66
CcnkO88874 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.93□□□□□ -0.66
CcnkO88874 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
CcnkO88874 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
CcnkO88874 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
CcnkO88874 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
CcnkO88874 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcnkO88874 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
CcnkO88874 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
CcnkO88874 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcnkO88874 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcnkO88874 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.92□□□□□ -0.66
CcnkO88874 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcnkO88874 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcnkO88874 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
CcnkO88874 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.92□□□□□ -0.66
CcnkO88874 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcnkO88874 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcnkO88874 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcnkO88874 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcnkO88874 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcnkO88874 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms