Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cops4O88544 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.3□□□□□ -0.6
Cops4O88544 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cops4O88544 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Cops4O88544 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cops4O88544 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cops4O88544 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cops4O88544 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
Cops4O88544 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cops4O88544 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cops4O88544 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cops4O88544 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cops4O88544 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.29□□□□□ -0.6
Cops4O88544 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cops4O88544 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.29□□□□□ -0.6
Cops4O88544 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cops4O88544 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cops4O88544 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cops4O88544 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cops4O88544 Gm12384-201ENSMUST00000119228 919 ntBASIC11.29□□□□□ -0.6
Cops4O88544 Gm13612-201ENSMUST00000119276 390 ntBASIC11.29□□□□□ -0.6
Cops4O88544 Gm15703-201ENSMUST00000120250 880 ntBASIC11.29□□□□□ -0.6
Cops4O88544 Gm14704-201ENSMUST00000120300 874 ntBASIC11.29□□□□□ -0.6
Cops4O88544 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.29□□□□□ -0.6
Cops4O88544 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.29□□□□□ -0.6
Cops4O88544 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.29□□□□□ -0.6
Cops4O88544 Gm6745-201ENSMUST00000199216 526 ntBASIC11.29□□□□□ -0.6
Cops4O88544 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cops4O88544 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.29□□□□□ -0.6
Cops4O88544 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cops4O88544 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cops4O88544 Gm6180-201ENSMUST00000065243 498 ntBASIC11.29□□□□□ -0.6
Cops4O88544 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cops4O88544 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cops4O88544 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.29□□□□□ -0.6
Cops4O88544 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cops4O88544 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cops4O88544 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.29□□□□□ -0.6
Cops4O88544 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cops4O88544 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cops4O88544 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cops4O88544 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.29□□□□□ -0.6
Cops4O88544 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cops4O88544 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cops4O88544 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cops4O88544 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cops4O88544 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cops4O88544 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cops4O88544 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.28□□□□□ -0.6
Cops4O88544 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cops4O88544 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cops4O88544 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cops4O88544 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cops4O88544 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cops4O88544 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cops4O88544 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cops4O88544 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Cops4O88544 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cops4O88544 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.28□□□□□ -0.6
Cops4O88544 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cops4O88544 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.28□□□□□ -0.6
Cops4O88544 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cops4O88544 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.28□□□□□ -0.6
Cops4O88544 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cops4O88544 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cops4O88544 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cops4O88544 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cops4O88544 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cops4O88544 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cops4O88544 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.28□□□□□ -0.6
Cops4O88544 Gm14928-201ENSMUST00000120198 477 ntBASIC11.28□□□□□ -0.6
Cops4O88544 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cops4O88544 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Cops4O88544 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cops4O88544 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.28□□□□□ -0.6
Cops4O88544 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.28□□□□□ -0.6
Cops4O88544 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.28□□□□□ -0.6
Cops4O88544 Gm9908-201ENSMUST00000211534 448 ntBASIC11.28□□□□□ -0.6
Cops4O88544 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Cops4O88544 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.28□□□□□ -0.6
Cops4O88544 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cops4O88544 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cops4O88544 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cops4O88544 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cops4O88544 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cops4O88544 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cops4O88544 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.28□□□□□ -0.6
Cops4O88544 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cops4O88544 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Cops4O88544 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cops4O88544 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cops4O88544 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cops4O88544 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Cops4O88544 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cops4O88544 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms