Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chrna4O70174 Gm15198-201ENSMUST00000117283 177 ntBASIC12.34□□□□□ -0.43
Chrna4O70174 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chrna4O70174 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chrna4O70174 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.34□□□□□ -0.43
Chrna4O70174 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.34□□□□□ -0.43
Chrna4O70174 Gm42599-201ENSMUST00000201308 469 ntBASIC12.34□□□□□ -0.43
Chrna4O70174 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chrna4O70174 Gm21769-201ENSMUST00000211922 111 ntBASIC12.34□□□□□ -0.43
Chrna4O70174 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.34□□□□□ -0.43
Chrna4O70174 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.34□□□□□ -0.43
Chrna4O70174 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.34□□□□□ -0.43
Chrna4O70174 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chrna4O70174 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chrna4O70174 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chrna4O70174 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chrna4O70174 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chrna4O70174 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Chrna4O70174 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.34□□□□□ -0.43
Chrna4O70174 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chrna4O70174 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chrna4O70174 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Chrna4O70174 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chrna4O70174 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.34□□□□□ -0.43
Chrna4O70174 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Chrna4O70174 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Chrna4O70174 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Chrna4O70174 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Chrna4O70174 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chrna4O70174 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Chrna4O70174 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chrna4O70174 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chrna4O70174 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chrna4O70174 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chrna4O70174 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chrna4O70174 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.33□□□□□ -0.44
Chrna4O70174 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Chrna4O70174 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.33□□□□□ -0.44
Chrna4O70174 Gm14726-201ENSMUST00000120623 896 ntBASIC12.33□□□□□ -0.44
Chrna4O70174 Gm15547-201ENSMUST00000122152 333 ntBASIC12.33□□□□□ -0.44
Chrna4O70174 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.33□□□□□ -0.44
Chrna4O70174 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.33□□□□□ -0.44
Chrna4O70174 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.33□□□□□ -0.44
Chrna4O70174 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chrna4O70174 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Chrna4O70174 Gm31256-201ENSMUST00000194705 506 ntBASIC12.33□□□□□ -0.44
Chrna4O70174 Gm38266-201ENSMUST00000194931 421 ntBASIC12.33□□□□□ -0.44
Chrna4O70174 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Chrna4O70174 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chrna4O70174 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chrna4O70174 Gm45331-201ENSMUST00000209868 554 ntBASIC12.33□□□□□ -0.44
Chrna4O70174 Gm19994-201ENSMUST00000217086 586 ntBASIC12.33□□□□□ -0.44
Chrna4O70174 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.33□□□□□ -0.44
Chrna4O70174 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.33□□□□□ -0.44
Chrna4O70174 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chrna4O70174 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chrna4O70174 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chrna4O70174 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chrna4O70174 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chrna4O70174 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Chrna4O70174 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Chrna4O70174 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.33□□□□□ -0.44
Chrna4O70174 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chrna4O70174 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chrna4O70174 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chrna4O70174 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chrna4O70174 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.33□□□□□ -0.44
Chrna4O70174 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chrna4O70174 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chrna4O70174 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.33□□□□□ -0.44
Chrna4O70174 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chrna4O70174 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chrna4O70174 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chrna4O70174 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chrna4O70174 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chrna4O70174 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chrna4O70174 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chrna4O70174 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chrna4O70174 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chrna4O70174 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Chrna4O70174 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Chrna4O70174 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Chrna4O70174 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chrna4O70174 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.32□□□□□ -0.44
Chrna4O70174 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chrna4O70174 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chrna4O70174 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Chrna4O70174 Gm14723-201ENSMUST00000118686 215 ntBASIC12.32□□□□□ -0.44
Chrna4O70174 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.32□□□□□ -0.44
Chrna4O70174 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chrna4O70174 Rprl1-201ENSMUST00000158050 327 ntBASIC12.32□□□□□ -0.44
Chrna4O70174 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.32□□□□□ -0.44
Chrna4O70174 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.32□□□□□ -0.44
Chrna4O70174 Gm43758-201ENSMUST00000199500 367 ntBASIC12.32□□□□□ -0.44
Chrna4O70174 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.32□□□□□ -0.44
Chrna4O70174 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.32□□□□□ -0.44
Chrna4O70174 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Chrna4O70174 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chrna4O70174 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.32□□□□□ -0.44
Chrna4O70174 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms