Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.09□□□□□ -0.63
Rnf13O54965 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.09□□□□□ -0.63
Rnf13O54965 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.09□□□□□ -0.63
Rnf13O54965 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf13O54965 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf13O54965 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf13O54965 Gm10012-201ENSMUST00000078252 192 ntBASIC11.09□□□□□ -0.63
Rnf13O54965 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Rnf13O54965 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf13O54965 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf13O54965 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf13O54965 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf13O54965 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf13O54965 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf13O54965 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf13O54965 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.09□□□□□ -0.63
Rnf13O54965 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.09□□□□□ -0.63
Rnf13O54965 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf13O54965 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf13O54965 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf13O54965 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf13O54965 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.09□□□□□ -0.63
Rnf13O54965 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.09□□□□□ -0.63
Rnf13O54965 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.09□□□□□ -0.63
Rnf13O54965 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf13O54965 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rnf13O54965 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf13O54965 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.09□□□□□ -0.63
Rnf13O54965 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Rnf13O54965 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf13O54965 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf13O54965 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf13O54965 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Rnf13O54965 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf13O54965 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rnf13O54965 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf13O54965 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Rnf13O54965 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf13O54965 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf13O54965 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.08□□□□□ -0.64
Rnf13O54965 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.08□□□□□ -0.64
Rnf13O54965 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf13O54965 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf13O54965 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.08□□□□□ -0.64
Rnf13O54965 Gm22331-201ENSMUST00000158066 136 ntBASIC11.08□□□□□ -0.64
Rnf13O54965 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.08□□□□□ -0.64
Rnf13O54965 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.08□□□□□ -0.64
Rnf13O54965 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf13O54965 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.08□□□□□ -0.64
Rnf13O54965 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf13O54965 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.08□□□□□ -0.64
Rnf13O54965 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Rnf13O54965 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.08□□□□□ -0.64
Rnf13O54965 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf13O54965 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf13O54965 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf13O54965 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Rnf13O54965 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf13O54965 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rnf13O54965 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Rnf13O54965 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf13O54965 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf13O54965 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf13O54965 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.08□□□□□ -0.64
Rnf13O54965 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rnf13O54965 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf13O54965 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf13O54965 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf13O54965 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf13O54965 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rnf13O54965 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf13O54965 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.08□□□□□ -0.64
Rnf13O54965 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf13O54965 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.08□□□□□ -0.64
Rnf13O54965 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.07□□□□□ -0.64
Rnf13O54965 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rnf13O54965 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.07□□□□□ -0.64
Rnf13O54965 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rnf13O54965 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.07□□□□□ -0.64
Rnf13O54965 Gm11597-201ENSMUST00000121423 964 ntBASIC11.07□□□□□ -0.64
Rnf13O54965 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 Gm8652-201ENSMUST00000181363 964 ntBASIC11.07□□□□□ -0.64
Rnf13O54965 Gm27486-201ENSMUST00000184923 80 ntBASIC11.07□□□□□ -0.64
Rnf13O54965 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.07□□□□□ -0.64
Rnf13O54965 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms