Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc4O35988 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.62□□□□□ -0.39
Sdc4O35988 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc4O35988 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.62□□□□□ -0.39
Sdc4O35988 Gm18711-201ENSMUST00000199341 750 ntBASIC12.62□□□□□ -0.39
Sdc4O35988 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sdc4O35988 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc4O35988 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc4O35988 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc4O35988 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc4O35988 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc4O35988 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc4O35988 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc4O35988 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc4O35988 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sdc4O35988 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc4O35988 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sdc4O35988 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.61□□□□□ -0.39
Sdc4O35988 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.61□□□□□ -0.39
Sdc4O35988 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc4O35988 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Sdc4O35988 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc4O35988 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc4O35988 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc4O35988 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc4O35988 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc4O35988 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.61□□□□□ -0.39
Sdc4O35988 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc4O35988 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.61□□□□□ -0.39
Sdc4O35988 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Sdc4O35988 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Sdc4O35988 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc4O35988 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.61□□□□□ -0.39
Sdc4O35988 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.61□□□□□ -0.39
Sdc4O35988 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc4O35988 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Sdc4O35988 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Sdc4O35988 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc4O35988 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc4O35988 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.61□□□□□ -0.39
Sdc4O35988 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc4O35988 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc4O35988 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc4O35988 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc4O35988 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc4O35988 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc4O35988 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc4O35988 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc4O35988 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sdc4O35988 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc4O35988 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sdc4O35988 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc4O35988 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Sdc4O35988 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc4O35988 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.6□□□□□ -0.39
Sdc4O35988 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.6□□□□□ -0.39
Sdc4O35988 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc4O35988 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.6□□□□□ -0.39
Sdc4O35988 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc4O35988 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc4O35988 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc4O35988 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc4O35988 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sdc4O35988 Gm23949-201ENSMUST00000104027 127 ntBASIC12.6□□□□□ -0.39
Sdc4O35988 Gm23200-201ENSMUST00000104379 132 ntBASIC12.6□□□□□ -0.39
Sdc4O35988 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.6□□□□□ -0.39
Sdc4O35988 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc4O35988 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Sdc4O35988 Gm25732-201ENSMUST00000175168 60 ntBASIC12.6□□□□□ -0.39
Sdc4O35988 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.6□□□□□ -0.39
Sdc4O35988 Gm44882-201ENSMUST00000205702 802 ntBASIC12.6□□□□□ -0.39
Sdc4O35988 Gm17827-201ENSMUST00000211825 742 ntBASIC12.6□□□□□ -0.39
Sdc4O35988 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc4O35988 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc4O35988 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc4O35988 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc4O35988 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc4O35988 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc4O35988 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc4O35988 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sdc4O35988 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc4O35988 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc4O35988 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sdc4O35988 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sdc4O35988 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc4O35988 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sdc4O35988 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sdc4O35988 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.59□□□□□ -0.39
Sdc4O35988 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc4O35988 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.59□□□□□ -0.39
Sdc4O35988 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc4O35988 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
Sdc4O35988 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.59□□□□□ -0.39
Sdc4O35988 Gm15711-201ENSMUST00000118889 535 ntBASIC12.59□□□□□ -0.39
Sdc4O35988 Gm12380-201ENSMUST00000119012 544 ntBASIC12.59□□□□□ -0.39
Sdc4O35988 Gm12566-201ENSMUST00000121479 359 ntBASIC12.59□□□□□ -0.39
Sdc4O35988 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.59□□□□□ -0.39
Sdc4O35988 Rprl1-201ENSMUST00000158050 327 ntBASIC12.59□□□□□ -0.39
Sdc4O35988 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.59□□□□□ -0.39
Sdc4O35988 Gm18038-201ENSMUST00000197900 485 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms