Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
NpcdF8VQB8 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NpcdF8VQB8 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NpcdF8VQB8 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
NpcdF8VQB8 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
NpcdF8VQB8 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.76□□□□□ -0.05
NpcdF8VQB8 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NpcdF8VQB8 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NpcdF8VQB8 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NpcdF8VQB8 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NpcdF8VQB8 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NpcdF8VQB8 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.75□□□□□ -0.05
NpcdF8VQB8 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NpcdF8VQB8 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC14.75□□□□□ -0.05
NpcdF8VQB8 Gm16071-201ENSMUST00000119589 793 ntBASIC14.75□□□□□ -0.05
NpcdF8VQB8 Gm15703-201ENSMUST00000120250 880 ntBASIC14.75□□□□□ -0.05
NpcdF8VQB8 Gm11434-201ENSMUST00000122379 629 ntBASIC14.75□□□□□ -0.05
NpcdF8VQB8 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NpcdF8VQB8 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
NpcdF8VQB8 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NpcdF8VQB8 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NpcdF8VQB8 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NpcdF8VQB8 Gm18159-201ENSMUST00000174516 1070 ntBASIC14.75□□□□□ -0.05
NpcdF8VQB8 Gm17826-201ENSMUST00000189720 798 ntBASIC14.75□□□□□ -0.05
NpcdF8VQB8 Gm42779-201ENSMUST00000198807 406 ntBASIC14.75□□□□□ -0.05
NpcdF8VQB8 Gm9785-201ENSMUST00000062642 1006 ntBASIC14.75□□□□□ -0.05
NpcdF8VQB8 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NpcdF8VQB8 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
NpcdF8VQB8 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NpcdF8VQB8 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.75□□□□□ -0.05
NpcdF8VQB8 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NpcdF8VQB8 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NpcdF8VQB8 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.75□□□□□ -0.05
NpcdF8VQB8 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NpcdF8VQB8 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NpcdF8VQB8 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NpcdF8VQB8 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Gm6485-201ENSMUST00000160676 439 ntBASIC14.74□□□□□ -0.05
NpcdF8VQB8 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Gm28388-201ENSMUST00000186262 437 ntBASIC14.74□□□□□ -0.05
NpcdF8VQB8 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Gm6722-201ENSMUST00000221586 390 ntBASIC14.74□□□□□ -0.05
NpcdF8VQB8 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NpcdF8VQB8 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NpcdF8VQB8 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NpcdF8VQB8 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Gm13916-201ENSMUST00000117368 628 ntBASIC14.73□□□□□ -0.05
NpcdF8VQB8 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC14.73□□□□□ -0.05
NpcdF8VQB8 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Gm44329-201ENSMUST00000197469 112 ntBASIC14.73□□□□□ -0.05
NpcdF8VQB8 Gm35713-201ENSMUST00000210516 199 ntBASIC14.73□□□□□ -0.05
NpcdF8VQB8 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Gm2875-201ENSMUST00000211333 360 ntBASIC14.73□□□□□ -0.05
NpcdF8VQB8 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Gm19009-201ENSMUST00000223072 823 ntBASIC14.73□□□□□ -0.05
NpcdF8VQB8 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
NpcdF8VQB8 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms