Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Gm25261-201ENSMUST00000157416 134 ntBASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Gm5370-201ENSMUST00000187187 574 ntBASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Gm12036-201ENSMUST00000120008 530 ntBASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Gm27023-201ENSMUST00000182372 285 ntBASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Gm27514-201ENSMUST00000183692 110 ntBASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh9F8VPK8 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh9F8VPK8 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh9F8VPK8 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
Pcdh9F8VPK8 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
Pcdh9F8VPK8 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh9F8VPK8 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh9F8VPK8 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Pcdh9F8VPK8 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh9F8VPK8 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh9F8VPK8 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh9F8VPK8 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.52□□□□□ -0.4
Pcdh9F8VPK8 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Gm14999-201ENSMUST00000121039 624 ntBASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Gm42937-201ENSMUST00000197360 752 ntBASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh9F8VPK8 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms