Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gm20614-201ENSMUST00000177106 632 ntBASIC12.31□□□□□ -0.44
Gm28043E0CXC2 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.31□□□□□ -0.44
Gm28043E0CXC2 AC073947.1-201ENSMUST00000216991 649 ntBASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm28043E0CXC2 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.29□□□□□ -0.44
Gm28043E0CXC2 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Gm23363-201ENSMUST00000175024 79 ntBASIC12.29□□□□□ -0.44
Gm28043E0CXC2 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Gm32025-201ENSMUST00000217960 307 ntBASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Gm45925-201ENSMUST00000218882 744 ntBASIC12.29□□□□□ -0.44
Gm28043E0CXC2 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Mir339-201ENSMUST00000083659 96 ntBASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Gm28043E0CXC2 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.28□□□□□ -0.44
Gm28043E0CXC2 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Gm28043E0CXC2 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms