Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1aA2APX8 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.75□□□□□ -0.37
Scn1aA2APX8 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.75□□□□□ -0.37
Scn1aA2APX8 Gm43138-201ENSMUST00000199123 708 ntBASIC12.75□□□□□ -0.37
Scn1aA2APX8 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1aA2APX8 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Scn1aA2APX8 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1aA2APX8 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1aA2APX8 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1aA2APX8 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.74□□□□□ -0.37
Scn1aA2APX8 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.74□□□□□ -0.37
Scn1aA2APX8 Gm21811-201ENSMUST00000096485 930 ntBASIC12.74□□□□□ -0.37
Scn1aA2APX8 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.74□□□□□ -0.37
Scn1aA2APX8 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Gm12176-201ENSMUST00000121420 875 ntBASIC12.74□□□□□ -0.37
Scn1aA2APX8 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.74□□□□□ -0.37
Scn1aA2APX8 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.74□□□□□ -0.37
Scn1aA2APX8 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1aA2APX8 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1aA2APX8 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1aA2APX8 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1aA2APX8 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1aA2APX8 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1aA2APX8 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Scn1aA2APX8 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.73□□□□□ -0.37
Scn1aA2APX8 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1aA2APX8 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.73□□□□□ -0.37
Scn1aA2APX8 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1aA2APX8 Gm8100-201ENSMUST00000182906 988 ntBASIC12.73□□□□□ -0.37
Scn1aA2APX8 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.73□□□□□ -0.37
Scn1aA2APX8 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1aA2APX8 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1aA2APX8 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms