Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Gm8738-201ENSMUST00000172606 329 ntBASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Gm38158-201ENSMUST00000194617 339 ntBASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Gm6007-201ENSMUST00000208170 823 ntBASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Gm45331-201ENSMUST00000209868 554 ntBASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Gm45930-201ENSMUST00000221330 292 ntBASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Gm7399-201ENSMUST00000032395 858 ntBASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sec61a2Q9JLR1 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Gm15703-201ENSMUST00000120250 880 ntBASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Gm11793-201ENSMUST00000120433 981 ntBASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Gm16379-201ENSMUST00000161469 348 ntBASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Gm27516-201ENSMUST00000184237 98 ntBASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Gm8762-201ENSMUST00000193486 339 ntBASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Gm22058-201ENSMUST00000083393 310 ntBASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61a2Q9JLR1 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms