Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ush1cQ9ES64 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Ush1cQ9ES64 Mir686-201ENSMUST00000102174 109 ntBASIC14.06□□□□□ -0.16
Ush1cQ9ES64 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ush1cQ9ES64 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ush1cQ9ES64 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.06□□□□□ -0.16
Ush1cQ9ES64 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.06□□□□□ -0.16
Ush1cQ9ES64 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ush1cQ9ES64 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ush1cQ9ES64 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Ush1cQ9ES64 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.06□□□□□ -0.16
Ush1cQ9ES64 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC14.06□□□□□ -0.16
Ush1cQ9ES64 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.06□□□□□ -0.16
Ush1cQ9ES64 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ush1cQ9ES64 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ush1cQ9ES64 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.06□□□□□ -0.16
Ush1cQ9ES64 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ush1cQ9ES64 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ush1cQ9ES64 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Ush1cQ9ES64 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.06□□□□□ -0.16
Ush1cQ9ES64 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ush1cQ9ES64 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ush1cQ9ES64 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ush1cQ9ES64 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Gm9908-201ENSMUST00000211534 448 ntBASIC14.05□□□□□ -0.16
Ush1cQ9ES64 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ush1cQ9ES64 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ush1cQ9ES64 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ush1cQ9ES64 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ush1cQ9ES64 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ush1cQ9ES64 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.04□□□□□ -0.16
Ush1cQ9ES64 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ush1cQ9ES64 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ush1cQ9ES64 Gm7642-201ENSMUST00000216345 1809 ntBASIC14.04□□□□□ -0.16
Ush1cQ9ES64 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ush1cQ9ES64 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ush1cQ9ES64 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC14.04□□□□□ -0.16
Ush1cQ9ES64 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.04□□□□□ -0.16
Ush1cQ9ES64 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ush1cQ9ES64 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC14.04□□□□□ -0.16
Ush1cQ9ES64 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ush1cQ9ES64 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ush1cQ9ES64 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ush1cQ9ES64 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ush1cQ9ES64 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ush1cQ9ES64 Gm38376-201ENSMUST00000195493 2253 ntBASIC14.04□□□□□ -0.16
Ush1cQ9ES64 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC14.04□□□□□ -0.16
Ush1cQ9ES64 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ush1cQ9ES64 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ush1cQ9ES64 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ush1cQ9ES64 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ush1cQ9ES64 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ush1cQ9ES64 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ush1cQ9ES64 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ush1cQ9ES64 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ush1cQ9ES64 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ush1cQ9ES64 Gm17230-201ENSMUST00000171194 3942 ntBASIC14.03□□□□□ -0.16
Ush1cQ9ES64 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ush1cQ9ES64 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ush1cQ9ES64 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
Ush1cQ9ES64 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ush1cQ9ES64 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Ush1cQ9ES64 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ush1cQ9ES64 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.03□□□□□ -0.16
Ush1cQ9ES64 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.03□□□□□ -0.16
Ush1cQ9ES64 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Ush1cQ9ES64 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Ush1cQ9ES64 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.03□□□□□ -0.16
Ush1cQ9ES64 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ush1cQ9ES64 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ush1cQ9ES64 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms