Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim42Q9D2H5 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim42Q9D2H5 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim42Q9D2H5 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim42Q9D2H5 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim42Q9D2H5 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.31□□□□□ -0.44
Trim42Q9D2H5 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.31□□□□□ -0.44
Trim42Q9D2H5 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim42Q9D2H5 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trim42Q9D2H5 Mir7023-201ENSMUST00000185093 64 ntBASIC12.31□□□□□ -0.44
Trim42Q9D2H5 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.31□□□□□ -0.44
Trim42Q9D2H5 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.31□□□□□ -0.44
Trim42Q9D2H5 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim42Q9D2H5 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim42Q9D2H5 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim42Q9D2H5 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim42Q9D2H5 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim42Q9D2H5 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim42Q9D2H5 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim42Q9D2H5 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim42Q9D2H5 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim42Q9D2H5 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim42Q9D2H5 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim42Q9D2H5 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim42Q9D2H5 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC12.31□□□□□ -0.44
Trim42Q9D2H5 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.31□□□□□ -0.44
Trim42Q9D2H5 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim42Q9D2H5 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim42Q9D2H5 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Gm23363-201ENSMUST00000175024 79 ntBASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Gm24694-201ENSMUST00000180054 110 ntBASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Gm27663-201ENSMUST00000184839 110 ntBASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Gm8099-201ENSMUST00000200510 742 ntBASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim42Q9D2H5 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC12.29□□□□□ -0.44
Trim42Q9D2H5 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms