Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Gm16202-201ENSMUST00000117532 544 ntBASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Gm4875-201ENSMUST00000118257 786 ntBASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 AC101945.2-201ENSMUST00000227886 1377 ntBASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Gm9755-201ENSMUST00000032981 1356 ntBASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 AC122811.1-201ENSMUST00000222257 2921 ntBASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
RTRAFQ9CQE8 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Gm37368-201ENSMUST00000193173 3212 ntBASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Gm43172-201ENSMUST00000202139 2137 ntBASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Gm11524-201ENSMUST00000119349 807 ntBASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 AC098716.1-201ENSMUST00000213527 703 ntBASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
RTRAFQ9CQE8 AC166359.1-201ENSMUST00000220243 1871 ntBASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
RTRAFQ9CQE8 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms