Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Gm12928-201ENSMUST00000117115 573 ntBASIC11.05□□□□□ -0.64
Krt88Q9CPR6 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Gm25927-201ENSMUST00000175058 117 ntBASIC11.05□□□□□ -0.64
Krt88Q9CPR6 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Gm4034-201ENSMUST00000187674 480 ntBASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Krt88Q9CPR6 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Gm16479-201ENSMUST00000121706 932 ntBASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Gm2231-201ENSMUST00000125661 612 ntBASIC11.04□□□□□ -0.64
Krt88Q9CPR6 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Krt88Q9CPR6 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
Krt88Q9CPR6 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms