Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Gm28138-201ENSMUST00000186250 2167 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Gm29270-201ENSMUST00000188071 2167 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Gm29392-201ENSMUST00000189429 2167 ntTSL 5 BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Gm29252-201ENSMUST00000189869 2167 ntTSL 5 BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Gm29305-201ENSMUST00000191054 2167 ntTSL 5 BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Tm4sf1-201ENSMUST00000029376 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gtf2a1Q99PM3 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Gm26862-201ENSMUST00000181886 2191 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Gm26780-201ENSMUST00000180748 2495 ntTSL 5 BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Gm25948-201ENSMUST00000175334 112 ntBASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 AC140462.2-201ENSMUST00000225718 2433 ntBASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gtf2a1Q99PM3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Gm1627-201ENSMUST00000188504 2588 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Gm29358-202ENSMUST00000187941 3227 ntBASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Rcan2-201ENSMUST00000044792 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Gm15483-201ENSMUST00000120338 456 ntBASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Gm38910-201ENSMUST00000204630 2448 ntBASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gtf2a1Q99PM3 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms