Protein–RNA interactions for Protein: Q99L02

Pagr1a, PAXIP1-associated glutamate-rich protein 1A, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pagr1aQ99L02 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pagr1aQ99L02 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pagr1aQ99L02 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.21□□□□□ -0.13
Pagr1aQ99L02 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Pagr1aQ99L02 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pagr1aQ99L02 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Pagr1aQ99L02 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pagr1aQ99L02 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pagr1aQ99L02 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pagr1aQ99L02 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pagr1aQ99L02 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Gm24891-201ENSMUST00000104391 136 ntBASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Gm11509-201ENSMUST00000117358 325 ntBASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC14.2□□□□□ -0.14
Pagr1aQ99L02 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Gm4157-201ENSMUST00000211647 679 ntBASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pagr1aQ99L02 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pagr1aQ99L02 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pagr1aQ99L02 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pagr1aQ99L02 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pagr1aQ99L02 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pagr1aQ99L02 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pagr1aQ99L02 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pagr1aQ99L02 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pagr1aQ99L02 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pagr1aQ99L02 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.19□□□□□ -0.14
Pagr1aQ99L02 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pagr1aQ99L02 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Pagr1aQ99L02 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pagr1aQ99L02 Gm28686-201ENSMUST00000187404 609 ntBASIC14.19□□□□□ -0.14
Pagr1aQ99L02 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pagr1aQ99L02 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Pagr1aQ99L02 Gm4607-201ENSMUST00000206649 577 ntBASIC14.19□□□□□ -0.14
Pagr1aQ99L02 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pagr1aQ99L02 Gm6781-201ENSMUST00000038304 1242 ntBASIC14.19□□□□□ -0.14
Pagr1aQ99L02 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pagr1aQ99L02 Gm10288-201ENSMUST00000084614 537 ntBASIC14.19□□□□□ -0.14
Pagr1aQ99L02 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pagr1aQ99L02 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.19□□□□□ -0.14
Pagr1aQ99L02 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14.19□□□□□ -0.14
Pagr1aQ99L02 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pagr1aQ99L02 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pagr1aQ99L02 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC14.19□□□□□ -0.14
Pagr1aQ99L02 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pagr1aQ99L02 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pagr1aQ99L02 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pagr1aQ99L02 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pagr1aQ99L02 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pagr1aQ99L02 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pagr1aQ99L02 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.18□□□□□ -0.14
Pagr1aQ99L02 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.18□□□□□ -0.14
Pagr1aQ99L02 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pagr1aQ99L02 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pagr1aQ99L02 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Pagr1aQ99L02 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms