Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Usp11Q99K46 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Usp11Q99K46 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Usp11Q99K46 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.94□□□□□ -0.34
Usp11Q99K46 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.94□□□□□ -0.34
Usp11Q99K46 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Usp11Q99K46 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp11Q99K46 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp11Q99K46 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Usp11Q99K46 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp11Q99K46 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp11Q99K46 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp11Q99K46 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp11Q99K46 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Usp11Q99K46 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp11Q99K46 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp11Q99K46 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Usp11Q99K46 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp11Q99K46 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
Usp11Q99K46 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp11Q99K46 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp11Q99K46 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp11Q99K46 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp11Q99K46 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp11Q99K46 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp11Q99K46 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.93□□□□□ -0.34
Usp11Q99K46 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.93□□□□□ -0.34
Usp11Q99K46 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp11Q99K46 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.93□□□□□ -0.34
Usp11Q99K46 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.93□□□□□ -0.34
Usp11Q99K46 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.93□□□□□ -0.34
Usp11Q99K46 Gm43118-201ENSMUST00000199149 775 ntBASIC12.93□□□□□ -0.34
Usp11Q99K46 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Usp11Q99K46 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp11Q99K46 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp11Q99K46 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.93□□□□□ -0.34
Usp11Q99K46 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Usp11Q99K46 Gm9823-201ENSMUST00000051212 327 ntBASIC12.93□□□□□ -0.34
Usp11Q99K46 Gm24526-201ENSMUST00000082921 158 ntBASIC12.93□□□□□ -0.34
Usp11Q99K46 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp11Q99K46 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Usp11Q99K46 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp11Q99K46 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Usp11Q99K46 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.93□□□□□ -0.34
Usp11Q99K46 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp11Q99K46 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp11Q99K46 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Usp11Q99K46 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.93□□□□□ -0.34
Usp11Q99K46 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Usp11Q99K46 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp11Q99K46 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.93□□□□□ -0.34
Usp11Q99K46 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Usp11Q99K46 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp11Q99K46 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp11Q99K46 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp11Q99K46 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp11Q99K46 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.92□□□□□ -0.34
Usp11Q99K46 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.92□□□□□ -0.34
Usp11Q99K46 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.92□□□□□ -0.34
Usp11Q99K46 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Usp11Q99K46 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp11Q99K46 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.92□□□□□ -0.34
Usp11Q99K46 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.92□□□□□ -0.34
Usp11Q99K46 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.92□□□□□ -0.34
Usp11Q99K46 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.92□□□□□ -0.34
Usp11Q99K46 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp11Q99K46 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp11Q99K46 Gm42627-201ENSMUST00000197347 224 ntBASIC12.92□□□□□ -0.34
Usp11Q99K46 Gm6013-201ENSMUST00000212264 699 ntBASIC12.92□□□□□ -0.34
Usp11Q99K46 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.92□□□□□ -0.34
Usp11Q99K46 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp11Q99K46 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp11Q99K46 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp11Q99K46 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp11Q99K46 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp11Q99K46 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Usp11Q99K46 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Usp11Q99K46 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp11Q99K46 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp11Q99K46 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp11Q99K46 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp11Q99K46 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Usp11Q99K46 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp11Q99K46 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp11Q99K46 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp11Q99K46 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.92□□□□□ -0.34
Usp11Q99K46 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms