Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Gm26956-201ENSMUST00000182176 986 ntBASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Gm27501-201ENSMUST00000183599 107 ntBASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Gm18711-201ENSMUST00000199341 750 ntBASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Gm9996-201ENSMUST00000070359 913 ntBASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb1Q91Y08 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb1Q91Y08 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms