Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Gm43758-201ENSMUST00000199500 367 ntBASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhga4Q91XY4 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Gm13350-201ENSMUST00000120519 479 ntBASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Gm25668-201ENSMUST00000157700 129 ntBASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Gm2546-201ENSMUST00000182630 991 ntBASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga4Q91XY4 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Gm37201-201ENSMUST00000191845 523 ntBASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Gm31256-201ENSMUST00000194705 506 ntBASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Gm6334-201ENSMUST00000207083 228 ntBASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga4Q91XY4 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms