Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim60Q8VI40 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim60Q8VI40 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim60Q8VI40 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim60Q8VI40 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.67□□□□□ -0.38
Trim60Q8VI40 Gm16177-201ENSMUST00000120728 718 ntBASIC12.67□□□□□ -0.38
Trim60Q8VI40 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim60Q8VI40 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim60Q8VI40 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.67□□□□□ -0.38
Trim60Q8VI40 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim60Q8VI40 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.67□□□□□ -0.38
Trim60Q8VI40 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim60Q8VI40 Gm5781-201ENSMUST00000219792 443 ntBASIC12.67□□□□□ -0.38
Trim60Q8VI40 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.67□□□□□ -0.38
Trim60Q8VI40 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim60Q8VI40 Gm10076-201ENSMUST00000073238 384 ntBASIC12.67□□□□□ -0.38
Trim60Q8VI40 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trim60Q8VI40 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trim60Q8VI40 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim60Q8VI40 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim60Q8VI40 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim60Q8VI40 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trim60Q8VI40 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim60Q8VI40 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim60Q8VI40 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim60Q8VI40 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim60Q8VI40 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim60Q8VI40 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim60Q8VI40 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim60Q8VI40 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim60Q8VI40 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.66□□□□□ -0.38
Trim60Q8VI40 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim60Q8VI40 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trim60Q8VI40 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim60Q8VI40 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.66□□□□□ -0.38
Trim60Q8VI40 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim60Q8VI40 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim60Q8VI40 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim60Q8VI40 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trim60Q8VI40 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trim60Q8VI40 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim60Q8VI40 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim60Q8VI40 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.66□□□□□ -0.38
Trim60Q8VI40 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim60Q8VI40 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim60Q8VI40 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.66□□□□□ -0.38
Trim60Q8VI40 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim60Q8VI40 Gm27023-201ENSMUST00000182372 285 ntBASIC12.66□□□□□ -0.38
Trim60Q8VI40 Gm43433-201ENSMUST00000196573 481 ntBASIC12.66□□□□□ -0.38
Trim60Q8VI40 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.66□□□□□ -0.38
Trim60Q8VI40 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.66□□□□□ -0.38
Trim60Q8VI40 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim60Q8VI40 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim60Q8VI40 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trim60Q8VI40 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim60Q8VI40 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim60Q8VI40 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim60Q8VI40 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim60Q8VI40 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trim60Q8VI40 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trim60Q8VI40 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim60Q8VI40 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.65□□□□□ -0.38
Trim60Q8VI40 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.65□□□□□ -0.38
Trim60Q8VI40 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trim60Q8VI40 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim60Q8VI40 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Gm24830-201ENSMUST00000102024 166 ntBASIC12.65□□□□□ -0.38
Trim60Q8VI40 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim60Q8VI40 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Gm8738-201ENSMUST00000172606 329 ntBASIC12.65□□□□□ -0.38
Trim60Q8VI40 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim60Q8VI40 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Gm29127-201ENSMUST00000188304 517 ntBASIC12.65□□□□□ -0.38
Trim60Q8VI40 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.65□□□□□ -0.38
Trim60Q8VI40 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.65□□□□□ -0.38
Trim60Q8VI40 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.65□□□□□ -0.38
Trim60Q8VI40 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Gm26232-201ENSMUST00000083360 166 ntBASIC12.65□□□□□ -0.38
Trim60Q8VI40 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.65□□□□□ -0.38
Trim60Q8VI40 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trim60Q8VI40 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms