Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Nup35Q8R4R6 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nup35Q8R4R6 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nup35Q8R4R6 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Nup35Q8R4R6 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC9.99□□□□□ -0.81
Nup35Q8R4R6 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nup35Q8R4R6 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Nup35Q8R4R6 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nup35Q8R4R6 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Nup35Q8R4R6 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC9.99□□□□□ -0.81
Nup35Q8R4R6 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Nup35Q8R4R6 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nup35Q8R4R6 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.99□□□□□ -0.81
Nup35Q8R4R6 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Nup35Q8R4R6 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Gm15897-201ENSMUST00000117770 1486 ntBASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 AC153974.2-201ENSMUST00000218577 1025 ntBASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Gm9816-201ENSMUST00000122292 1414 ntBASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nup35Q8R4R6 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Gm13369-201ENSMUST00000119442 987 ntBASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Gm23119-201ENSMUST00000158610 140 ntBASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Gm19163-201ENSMUST00000223313 780 ntBASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Gm15823-201ENSMUST00000064305 670 ntBASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 AC108858.2-201ENSMUST00000228186 1425 ntBASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC9.97□□□□□ -0.81
Nup35Q8R4R6 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms