Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
ShfQ8CG80 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ShfQ8CG80 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ShfQ8CG80 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ShfQ8CG80 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.92□□□□□ -0.66
ShfQ8CG80 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ShfQ8CG80 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ShfQ8CG80 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
ShfQ8CG80 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
ShfQ8CG80 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.92□□□□□ -0.66
ShfQ8CG80 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ShfQ8CG80 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
ShfQ8CG80 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ShfQ8CG80 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
ShfQ8CG80 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.92□□□□□ -0.66
ShfQ8CG80 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ShfQ8CG80 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.92□□□□□ -0.66
ShfQ8CG80 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ShfQ8CG80 Gm25927-201ENSMUST00000175058 117 ntBASIC10.92□□□□□ -0.66
ShfQ8CG80 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ShfQ8CG80 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.92□□□□□ -0.66
ShfQ8CG80 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ShfQ8CG80 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
ShfQ8CG80 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.92□□□□□ -0.66
ShfQ8CG80 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.92□□□□□ -0.66
ShfQ8CG80 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.92□□□□□ -0.66
ShfQ8CG80 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ShfQ8CG80 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ShfQ8CG80 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.92□□□□□ -0.66
ShfQ8CG80 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ShfQ8CG80 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
ShfQ8CG80 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
ShfQ8CG80 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ShfQ8CG80 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.92□□□□□ -0.66
ShfQ8CG80 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ShfQ8CG80 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ShfQ8CG80 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ShfQ8CG80 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.92□□□□□ -0.66
ShfQ8CG80 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
ShfQ8CG80 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ShfQ8CG80 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ShfQ8CG80 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.92□□□□□ -0.66
ShfQ8CG80 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
ShfQ8CG80 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.91□□□□□ -0.66
ShfQ8CG80 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
ShfQ8CG80 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
ShfQ8CG80 Gm24934-201ENSMUST00000103764 111 ntBASIC10.91□□□□□ -0.66
ShfQ8CG80 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.91□□□□□ -0.66
ShfQ8CG80 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.91□□□□□ -0.66
ShfQ8CG80 Gm16379-201ENSMUST00000161469 348 ntBASIC10.91□□□□□ -0.66
ShfQ8CG80 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
ShfQ8CG80 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 Gm27023-201ENSMUST00000182372 285 ntBASIC10.91□□□□□ -0.66
ShfQ8CG80 Gm8762-201ENSMUST00000193486 339 ntBASIC10.91□□□□□ -0.66
ShfQ8CG80 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
ShfQ8CG80 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.91□□□□□ -0.66
ShfQ8CG80 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.91□□□□□ -0.66
ShfQ8CG80 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.91□□□□□ -0.66
ShfQ8CG80 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.91□□□□□ -0.66
ShfQ8CG80 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ShfQ8CG80 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
ShfQ8CG80 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
ShfQ8CG80 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ShfQ8CG80 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.9□□□□□ -0.66
ShfQ8CG80 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ShfQ8CG80 Paupar-201ENSMUST00000194826 3482 ntBASIC10.9□□□□□ -0.66
ShfQ8CG80 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ShfQ8CG80 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ShfQ8CG80 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
ShfQ8CG80 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
ShfQ8CG80 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
ShfQ8CG80 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
ShfQ8CG80 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
ShfQ8CG80 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
ShfQ8CG80 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms