Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Usp47Q8BY87 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC17.22■□□□□ 0.35
Usp47Q8BY87 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp47Q8BY87 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC17.22■□□□□ 0.35
Usp47Q8BY87 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp47Q8BY87 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp47Q8BY87 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp47Q8BY87 Gm43138-201ENSMUST00000199123 708 ntBASIC17.22■□□□□ 0.35
Usp47Q8BY87 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC17.22■□□□□ 0.35
Usp47Q8BY87 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC17.22■□□□□ 0.35
Usp47Q8BY87 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp47Q8BY87 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC17.22■□□□□ 0.35
Usp47Q8BY87 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp47Q8BY87 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp47Q8BY87 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp47Q8BY87 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Usp47Q8BY87 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC17.22■□□□□ 0.35
Usp47Q8BY87 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC17.22■□□□□ 0.35
Usp47Q8BY87 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Usp47Q8BY87 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp47Q8BY87 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp47Q8BY87 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp47Q8BY87 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp47Q8BY87 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp47Q8BY87 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC17.21■□□□□ 0.35
Usp47Q8BY87 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp47Q8BY87 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Usp47Q8BY87 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp47Q8BY87 Gm27177-202ENSMUST00000183514 2703 ntBASIC17.21■□□□□ 0.35
Usp47Q8BY87 Gm43807-201ENSMUST00000200678 1781 ntBASIC17.21■□□□□ 0.35
Usp47Q8BY87 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp47Q8BY87 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Usp47Q8BY87 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Usp47Q8BY87 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp47Q8BY87 Gm14058-201ENSMUST00000116082 735 ntBASIC17.21■□□□□ 0.35
Usp47Q8BY87 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC17.21■□□□□ 0.35
Usp47Q8BY87 Gm9797-202ENSMUST00000218003 294 ntBASIC17.21■□□□□ 0.35
Usp47Q8BY87 Abhd11os-203ENSMUST00000222613 363 ntBASIC17.21■□□□□ 0.35
Usp47Q8BY87 Nsd1-205ENSMUST00000224693 852 ntBASIC17.21■□□□□ 0.35
Usp47Q8BY87 Gm21811-201ENSMUST00000096485 930 ntBASIC17.21■□□□□ 0.35
Usp47Q8BY87 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp47Q8BY87 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Usp47Q8BY87 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp47Q8BY87 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC17.21■□□□□ 0.35
Usp47Q8BY87 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
Usp47Q8BY87 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp47Q8BY87 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Usp47Q8BY87 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Usp47Q8BY87 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Usp47Q8BY87 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Usp47Q8BY87 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
Usp47Q8BY87 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Gm12501-201ENSMUST00000119163 529 ntBASIC17.2■□□□□ 0.34
Usp47Q8BY87 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Gm25881-201ENSMUST00000157783 103 ntBASIC17.2■□□□□ 0.34
Usp47Q8BY87 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Gm9136-201ENSMUST00000193368 454 ntBASIC17.2■□□□□ 0.34
Usp47Q8BY87 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC17.2■□□□□ 0.34
Usp47Q8BY87 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp47Q8BY87 AC129931.1-201ENSMUST00000228865 1861 ntBASIC17.2■□□□□ 0.34
Usp47Q8BY87 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp47Q8BY87 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp47Q8BY87 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Usp47Q8BY87 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp47Q8BY87 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Usp47Q8BY87 Ntrk2-208ENSMUST00000225583 2719 ntBASIC17.19■□□□□ 0.34
Usp47Q8BY87 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp47Q8BY87 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp47Q8BY87 Gm15172-201ENSMUST00000118945 1046 ntBASIC17.19■□□□□ 0.34
Usp47Q8BY87 Gm12176-201ENSMUST00000121420 875 ntBASIC17.19■□□□□ 0.34
Usp47Q8BY87 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC17.19■□□□□ 0.34
Usp47Q8BY87 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp47Q8BY87 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp47Q8BY87 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Usp47Q8BY87 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms