Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.9□□□□□ -0.5
Cpsf4Q8BQZ5 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.9□□□□□ -0.5
Cpsf4Q8BQZ5 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4Q8BQZ5 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4Q8BQZ5 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4Q8BQZ5 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4Q8BQZ5 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Cpsf4Q8BQZ5 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4Q8BQZ5 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4Q8BQZ5 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cpsf4Q8BQZ5 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cpsf4Q8BQZ5 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Cpsf4Q8BQZ5 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cpsf4Q8BQZ5 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cpsf4Q8BQZ5 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cpsf4Q8BQZ5 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Cpsf4Q8BQZ5 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Cpsf4Q8BQZ5 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Gm4986-201ENSMUST00000119731 549 ntBASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Gm16296-201ENSMUST00000159905 325 ntBASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Gm2991-201ENSMUST00000173338 480 ntBASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Gm37489-201ENSMUST00000191883 159 ntBASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Gm43758-201ENSMUST00000199500 367 ntBASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Gm43822-201ENSMUST00000200285 476 ntBASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cpsf4Q8BQZ5 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Gm12241-201ENSMUST00000118330 726 ntBASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Gm13342-201ENSMUST00000121055 207 ntBASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Gm7584-201ENSMUST00000175829 940 ntBASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Gm38266-201ENSMUST00000194931 421 ntBASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Gm22058-201ENSMUST00000083393 310 ntBASIC11.88□□□□□ -0.51
Cpsf4Q8BQZ5 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms