Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubp1Q811S7 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubp1Q811S7 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.16□□□□□ -0.46
Ubp1Q811S7 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ubp1Q811S7 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ubp1Q811S7 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.16□□□□□ -0.46
Ubp1Q811S7 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubp1Q811S7 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ubp1Q811S7 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ubp1Q811S7 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.15□□□□□ -0.46
Ubp1Q811S7 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.15□□□□□ -0.46
Ubp1Q811S7 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Mir6420-201ENSMUST00000185032 102 ntBASIC12.15□□□□□ -0.46
Ubp1Q811S7 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.15□□□□□ -0.46
Ubp1Q811S7 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Gm26226-201ENSMUST00000082509 116 ntBASIC12.15□□□□□ -0.46
Ubp1Q811S7 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ubp1Q811S7 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ubp1Q811S7 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ubp1Q811S7 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ubp1Q811S7 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ubp1Q811S7 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ubp1Q811S7 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ubp1Q811S7 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ubp1Q811S7 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Ubp1Q811S7 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.14□□□□□ -0.47
Ubp1Q811S7 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubp1Q811S7 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubp1Q811S7 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubp1Q811S7 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubp1Q811S7 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ubp1Q811S7 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubp1Q811S7 Gm23270-201ENSMUST00000104055 131 ntBASIC12.14□□□□□ -0.47
Ubp1Q811S7 Gm11222-201ENSMUST00000119005 738 ntBASIC12.14□□□□□ -0.47
Ubp1Q811S7 Gm9083-201ENSMUST00000120423 819 ntBASIC12.14□□□□□ -0.47
Ubp1Q811S7 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ubp1Q811S7 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.14□□□□□ -0.47
Ubp1Q811S7 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Ubp1Q811S7 Gm31256-201ENSMUST00000194705 506 ntBASIC12.14□□□□□ -0.47
Ubp1Q811S7 Gm42937-201ENSMUST00000197360 752 ntBASIC12.14□□□□□ -0.47
Ubp1Q811S7 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.14□□□□□ -0.47
Ubp1Q811S7 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubp1Q811S7 AC125539.1-201ENSMUST00000227423 622 ntBASIC12.14□□□□□ -0.47
Ubp1Q811S7 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubp1Q811S7 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ubp1Q811S7 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ubp1Q811S7 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubp1Q811S7 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ubp1Q811S7 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubp1Q811S7 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubp1Q811S7 Gm18829-201ENSMUST00000188150 1622 ntBASIC12.14□□□□□ -0.47
Ubp1Q811S7 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubp1Q811S7 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubp1Q811S7 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubp1Q811S7 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.14□□□□□ -0.47
Ubp1Q811S7 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubp1Q811S7 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubp1Q811S7 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubp1Q811S7 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubp1Q811S7 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubp1Q811S7 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ubp1Q811S7 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.13□□□□□ -0.47
Ubp1Q811S7 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.13□□□□□ -0.47
Ubp1Q811S7 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ubp1Q811S7 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubp1Q811S7 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms