Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Gm37593-201ENSMUST00000191669 3254 ntBASIC11.43□□□□□ -0.58
Pif1Q80SX8 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Pif1Q80SX8 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pif1Q80SX8 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Gm5082-203ENSMUST00000221920 1518 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Gm12314-201ENSMUST00000118104 538 ntBASIC11.42□□□□□ -0.58
Pif1Q80SX8 Gm12616-201ENSMUST00000118594 382 ntBASIC11.42□□□□□ -0.58
Pif1Q80SX8 Gm13461-201ENSMUST00000120980 662 ntBASIC11.42□□□□□ -0.58
Pif1Q80SX8 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.42□□□□□ -0.58
Pif1Q80SX8 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Mir1943-201ENSMUST00000158276 73 ntBASIC11.42□□□□□ -0.58
Pif1Q80SX8 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Gm12624-201ENSMUST00000177615 382 ntBASIC11.42□□□□□ -0.58
Pif1Q80SX8 Gm12621-201ENSMUST00000177760 382 ntBASIC11.42□□□□□ -0.58
Pif1Q80SX8 Gm12615-201ENSMUST00000177970 382 ntBASIC11.42□□□□□ -0.58
Pif1Q80SX8 Gm12622-201ENSMUST00000177975 382 ntBASIC11.42□□□□□ -0.58
Pif1Q80SX8 Gm12627-201ENSMUST00000178412 382 ntBASIC11.42□□□□□ -0.58
Pif1Q80SX8 Gm12625-201ENSMUST00000179122 382 ntBASIC11.42□□□□□ -0.58
Pif1Q80SX8 Gm12614-201ENSMUST00000179586 382 ntBASIC11.42□□□□□ -0.58
Pif1Q80SX8 Gm12613-201ENSMUST00000180323 382 ntBASIC11.42□□□□□ -0.58
Pif1Q80SX8 Gm27627-201ENSMUST00000183644 150 ntBASIC11.42□□□□□ -0.58
Pif1Q80SX8 Gm19187-201ENSMUST00000206781 892 ntBASIC11.42□□□□□ -0.58
Pif1Q80SX8 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Gm45118-201ENSMUST00000208928 825 ntBASIC11.42□□□□□ -0.58
Pif1Q80SX8 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.42□□□□□ -0.58
Pif1Q80SX8 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pif1Q80SX8 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Gm37813-201ENSMUST00000195003 3695 ntBASIC11.41□□□□□ -0.58
Pif1Q80SX8 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pif1Q80SX8 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pif1Q80SX8 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.41□□□□□ -0.58
Pif1Q80SX8 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.41□□□□□ -0.58
Pif1Q80SX8 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms