Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Gm2875-201ENSMUST00000211333 360 ntBASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 CT485606.1-201ENSMUST00000213187 878 ntBASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Acot6-202ENSMUST00000222921 3622 ntBASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Gm44882-201ENSMUST00000205702 802 ntBASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Gm19091-201ENSMUST00000208120 978 ntBASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 AC165260.2-203ENSMUST00000224237 336 ntBASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 AC154257.1-202ENSMUST00000224729 843 ntBASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx55Q6ZPL9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.9□□□□□ -0.19
Ddx55Q6ZPL9 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ddx55Q6ZPL9 Gm3765-201ENSMUST00000130985 1447 ntBASIC13.9□□□□□ -0.19
Ddx55Q6ZPL9 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ddx55Q6ZPL9 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Ddx55Q6ZPL9 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Gm18198-201ENSMUST00000204986 1551 ntBASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Gm25076-201ENSMUST00000104098 132 ntBASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Gm18367-201ENSMUST00000176139 600 ntBASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Gm5879-201ENSMUST00000089501 1209 ntBASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Ddx55Q6ZPL9 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms