Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Gm42550-201ENSMUST00000201553 960 ntBASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Gm26315-201ENSMUST00000083890 321 ntBASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rnf220Q6PDX6 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Mir7023-201ENSMUST00000185093 64 ntBASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Gm38223-201ENSMUST00000194484 695 ntBASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Gm5867-201ENSMUST00000063197 592 ntBASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf220Q6PDX6 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Gm42599-201ENSMUST00000201308 469 ntBASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Gm19220-201ENSMUST00000222682 803 ntBASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.6□□□□□ -0.55
Rnf220Q6PDX6 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms