Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smarcd3Q6P9Z1 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Gm26927-201ENSMUST00000182385 965 ntBASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Gm27839-201ENSMUST00000184242 106 ntBASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Smarcd3Q6P9Z1 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Gm9022-201ENSMUST00000182482 992 ntBASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Gm27243-201ENSMUST00000183964 521 ntBASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Gm29649-201ENSMUST00000185649 419 ntBASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Gm44882-201ENSMUST00000205702 802 ntBASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Gm6091-201ENSMUST00000098307 165 ntBASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smarcd3Q6P9Z1 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms