Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd1Q61466 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Gm7722-201ENSMUST00000120646 741 ntBASIC12.76□□□□□ -0.37
Smarcd1Q61466 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Gm5616-201ENSMUST00000165252 384 ntBASIC12.76□□□□□ -0.37
Smarcd1Q61466 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Gm8741-201ENSMUST00000174736 384 ntBASIC12.76□□□□□ -0.37
Smarcd1Q61466 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Gm37666-201ENSMUST00000194110 866 ntBASIC12.76□□□□□ -0.37
Smarcd1Q61466 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.76□□□□□ -0.37
Smarcd1Q61466 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd1Q61466 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd1Q61466 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.75□□□□□ -0.37
Smarcd1Q61466 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.75□□□□□ -0.37
Smarcd1Q61466 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.75□□□□□ -0.37
Smarcd1Q61466 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd1Q61466 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd1Q61466 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd1Q61466 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.74□□□□□ -0.37
Smarcd1Q61466 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.74□□□□□ -0.37
Smarcd1Q61466 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.74□□□□□ -0.37
Smarcd1Q61466 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smarcd1Q61466 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Gm22133-201ENSMUST00000102082 109 ntBASIC12.74□□□□□ -0.37
Smarcd1Q61466 Gm14247-201ENSMUST00000120950 237 ntBASIC12.74□□□□□ -0.37
Smarcd1Q61466 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.74□□□□□ -0.37
Smarcd1Q61466 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smarcd1Q61466 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.74□□□□□ -0.37
Smarcd1Q61466 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.74□□□□□ -0.37
Smarcd1Q61466 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd1Q61466 Gm5455-201ENSMUST00000058710 715 ntBASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms