Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc88aQ5SNZ0 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm9136-201ENSMUST00000193368 454 ntBASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 AC122408.1-201ENSMUST00000218949 218 ntBASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm9630-201ENSMUST00000178304 885 ntBASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm4482-201ENSMUST00000200876 742 ntBASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm10288-201ENSMUST00000084614 537 ntBASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm22133-201ENSMUST00000102082 109 ntBASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms