Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Gm11511-201ENSMUST00000118146 540 ntBASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Mir7677-201ENSMUST00000184226 67 ntBASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf38aQ4FK66 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38aQ4FK66 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 Gm11450-201ENSMUST00000121144 333 ntBASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 Gm43378-201ENSMUST00000199336 582 ntBASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38aQ4FK66 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Prpf38aQ4FK66 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms