Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.44□□□□□ -0.1
Limch1Q3UH68 Gm44882-201ENSMUST00000205702 802 ntBASIC14.44□□□□□ -0.1
Limch1Q3UH68 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.44□□□□□ -0.1
Limch1Q3UH68 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limch1Q3UH68 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limch1Q3UH68 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limch1Q3UH68 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Limch1Q3UH68 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limch1Q3UH68 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Limch1Q3UH68 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.44□□□□□ -0.1
Limch1Q3UH68 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limch1Q3UH68 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Limch1Q3UH68 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limch1Q3UH68 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Limch1Q3UH68 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limch1Q3UH68 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limch1Q3UH68 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Limch1Q3UH68 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Limch1Q3UH68 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Limch1Q3UH68 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Limch1Q3UH68 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limch1Q3UH68 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Limch1Q3UH68 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limch1Q3UH68 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Limch1Q3UH68 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Limch1Q3UH68 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limch1Q3UH68 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Limch1Q3UH68 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.43□□□□□ -0.1
Limch1Q3UH68 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.43□□□□□ -0.1
Limch1Q3UH68 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limch1Q3UH68 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Limch1Q3UH68 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limch1Q3UH68 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.43□□□□□ -0.1
Limch1Q3UH68 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Limch1Q3UH68 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Limch1Q3UH68 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.43□□□□□ -0.1
Limch1Q3UH68 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Limch1Q3UH68 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Limch1Q3UH68 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limch1Q3UH68 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.43□□□□□ -0.1
Limch1Q3UH68 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.43□□□□□ -0.1
Limch1Q3UH68 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Limch1Q3UH68 Gm24990-201ENSMUST00000157406 323 ntBASIC14.43□□□□□ -0.1
Limch1Q3UH68 Gm23119-201ENSMUST00000158610 140 ntBASIC14.43□□□□□ -0.1
Limch1Q3UH68 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.43□□□□□ -0.1
Limch1Q3UH68 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.43□□□□□ -0.1
Limch1Q3UH68 Gm13097-201ENSMUST00000210722 397 ntBASIC14.43□□□□□ -0.1
Limch1Q3UH68 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limch1Q3UH68 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Limch1Q3UH68 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limch1Q3UH68 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limch1Q3UH68 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limch1Q3UH68 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Limch1Q3UH68 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Limch1Q3UH68 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Limch1Q3UH68 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limch1Q3UH68 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Limch1Q3UH68 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Pck2-205ENSMUST00000226352 2784 ntBASIC14.42□□□□□ -0.1
Limch1Q3UH68 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Limch1Q3UH68 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Gm11531-201ENSMUST00000117614 555 ntBASIC14.42□□□□□ -0.1
Limch1Q3UH68 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.42□□□□□ -0.1
Limch1Q3UH68 Gm43138-201ENSMUST00000199123 708 ntBASIC14.42□□□□□ -0.1
Limch1Q3UH68 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limch1Q3UH68 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Gm43365-201ENSMUST00000196522 2106 ntBASIC14.42□□□□□ -0.1
Limch1Q3UH68 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Limch1Q3UH68 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Limch1Q3UH68 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Limch1Q3UH68 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Limch1Q3UH68 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.41□□□□□ -0.1
Limch1Q3UH68 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Limch1Q3UH68 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Limch1Q3UH68 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms