Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Q3U1D9 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Q3U1D9 Gm22133-201ENSMUST00000102082 109 ntBASIC10.67□□□□□ -0.7
Q3U1D9 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.67□□□□□ -0.7
Q3U1D9 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.67□□□□□ -0.7
Q3U1D9 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.67□□□□□ -0.7
Q3U1D9 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.67□□□□□ -0.7
Q3U1D9 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.67□□□□□ -0.7
Q3U1D9 Gm5616-201ENSMUST00000165252 384 ntBASIC10.67□□□□□ -0.7
Q3U1D9 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Q3U1D9 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Q3U1D9 Gm8741-201ENSMUST00000174736 384 ntBASIC10.67□□□□□ -0.7
Q3U1D9 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.67□□□□□ -0.7
Q3U1D9 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Q3U1D9 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Q3U1D9 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.67□□□□□ -0.7
Q3U1D9 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.67□□□□□ -0.7
Q3U1D9 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Q3U1D9 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.67□□□□□ -0.7
Q3U1D9 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Q3U1D9 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.66□□□□□ -0.7
Q3U1D9 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.66□□□□□ -0.7
Q3U1D9 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Q3U1D9 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Q3U1D9 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Q3U1D9 Gm23912-201ENSMUST00000104687 87 ntBASIC10.66□□□□□ -0.7
Q3U1D9 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Q3U1D9 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC10.66□□□□□ -0.7
Q3U1D9 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Gm25732-201ENSMUST00000175168 60 ntBASIC10.66□□□□□ -0.7
Q3U1D9 Mir6979-201ENSMUST00000183927 56 ntBASIC10.66□□□□□ -0.7
Q3U1D9 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.66□□□□□ -0.7
Q3U1D9 Gm37666-201ENSMUST00000194110 866 ntBASIC10.66□□□□□ -0.7
Q3U1D9 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.66□□□□□ -0.7
Q3U1D9 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.66□□□□□ -0.7
Q3U1D9 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Q3U1D9 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.66□□□□□ -0.7
Q3U1D9 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Q3U1D9 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Q3U1D9 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Q3U1D9 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Q3U1D9 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms