Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43aQ3TL54 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trim43aQ3TL54 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trim43aQ3TL54 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13□□□□□ -0.33
Trim43aQ3TL54 Zscan30-202ENSMUST00000224144 1458 ntBASIC13□□□□□ -0.33
Trim43aQ3TL54 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13□□□□□ -0.33
Trim43aQ3TL54 Gm42498-201ENSMUST00000199981 1372 ntBASIC13□□□□□ -0.33
Trim43aQ3TL54 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trim43aQ3TL54 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13□□□□□ -0.33
Trim43aQ3TL54 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13□□□□□ -0.33
Trim43aQ3TL54 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13□□□□□ -0.33
Trim43aQ3TL54 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13□□□□□ -0.33
Trim43aQ3TL54 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13□□□□□ -0.33
Trim43aQ3TL54 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Trim43aQ3TL54 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trim43aQ3TL54 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13□□□□□ -0.33
Trim43aQ3TL54 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Trim43aQ3TL54 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Trim43aQ3TL54 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trim43aQ3TL54 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim43aQ3TL54 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Gm11597-201ENSMUST00000121423 964 ntBASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Gm24644-201ENSMUST00000157114 139 ntBASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Gm23119-201ENSMUST00000158610 140 ntBASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Snora78-201ENSMUST00000158630 128 ntBASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Gm45784-201ENSMUST00000188360 142 ntBASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Gm6091-201ENSMUST00000098307 165 ntBASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim43aQ3TL54 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms