Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.88□□□□□ -0.67
Rab42Q0PD08 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.88□□□□□ -0.67
Rab42Q0PD08 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC10.88□□□□□ -0.67
Rab42Q0PD08 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.88□□□□□ -0.67
Rab42Q0PD08 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.88□□□□□ -0.67
Rab42Q0PD08 Gtpbp10-211ENSMUST00000198799 648 ntBASIC10.88□□□□□ -0.67
Rab42Q0PD08 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Gm42599-201ENSMUST00000201308 469 ntBASIC10.88□□□□□ -0.67
Rab42Q0PD08 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC10.88□□□□□ -0.67
Rab42Q0PD08 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.88□□□□□ -0.67
Rab42Q0PD08 AC154239.3-201ENSMUST00000226933 674 ntBASIC10.88□□□□□ -0.67
Rab42Q0PD08 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.88□□□□□ -0.67
Rab42Q0PD08 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Rab42Q0PD08 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Rab42Q0PD08 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Gm16202-201ENSMUST00000117532 544 ntBASIC10.87□□□□□ -0.67
Rab42Q0PD08 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Gm14928-201ENSMUST00000120198 477 ntBASIC10.87□□□□□ -0.67
Rab42Q0PD08 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.87□□□□□ -0.67
Rab42Q0PD08 Gm8463-201ENSMUST00000208573 613 ntBASIC10.87□□□□□ -0.67
Rab42Q0PD08 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab42Q0PD08 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC10.87□□□□□ -0.67
Rab42Q0PD08 AC150560.1-201ENSMUST00000227731 1187 ntBASIC10.87□□□□□ -0.67
Rab42Q0PD08 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Gm6180-201ENSMUST00000065243 498 ntBASIC10.87□□□□□ -0.67
Rab42Q0PD08 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab42Q0PD08 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rab42Q0PD08 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms