Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Gm16184-201ENSMUST00000162324 573 ntBASIC10.92□□□□□ -0.66
Chd8Q09XV5 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Mir704-201ENSMUST00000102106 77 ntBASIC10.92□□□□□ -0.66
Chd8Q09XV5 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Gm13201-201ENSMUST00000144031 600 ntTSL 3 BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Gm9523-201ENSMUST00000199146 1159 ntBASIC10.92□□□□□ -0.66
Chd8Q09XV5 Gm44315-201ENSMUST00000203041 219 ntBASIC10.92□□□□□ -0.66
Chd8Q09XV5 AC115304.2-201ENSMUST00000226399 332 ntBASIC10.92□□□□□ -0.66
Chd8Q09XV5 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Chd8Q09XV5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Chd8Q09XV5 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd8Q09XV5 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC10.91□□□□□ -0.66
Chd8Q09XV5 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Gm38233-201ENSMUST00000194259 807 ntBASIC10.91□□□□□ -0.66
Chd8Q09XV5 AC164556.1-201ENSMUST00000221318 751 ntBASIC10.91□□□□□ -0.66
Chd8Q09XV5 AC154213.1-201ENSMUST00000228234 583 ntBASIC10.91□□□□□ -0.66
Chd8Q09XV5 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC10.91□□□□□ -0.66
Chd8Q09XV5 AC154354.1-203ENSMUST00000225565 1364 ntBASIC10.91□□□□□ -0.66
Chd8Q09XV5 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Gm24934-201ENSMUST00000103764 111 ntBASIC10.91□□□□□ -0.66
Chd8Q09XV5 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd8Q09XV5 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd8Q09XV5 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd8Q09XV5 Gm12291-201ENSMUST00000121627 311 ntBASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms