Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm5939-201ENSMUST00000119613 2874 ntBASIC8.06□□□□□ -1.12
PrkdcP97313 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PrkdcP97313 Gm13284-201ENSMUST00000121020 547 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 Gm14829-201ENSMUST00000121499 1138 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC8.05□□□□□ -1.12
PrkdcP97313 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC8.05□□□□□ -1.12
PrkdcP97313 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
PrkdcP97313 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
PrkdcP97313 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
PrkdcP97313 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Gm4982-201ENSMUST00000160440 1098 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 Gm23647-201ENSMUST00000175042 109 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 Rn5s-201ENSMUST00000177555 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 n-R5s108-201ENSMUST00000177575 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 n-R5s121-201ENSMUST00000177589 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 n-R5s146-201ENSMUST00000177889 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 Gm22109-201ENSMUST00000177995 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 Gm22291-201ENSMUST00000178027 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 n-R5s141-201ENSMUST00000178066 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 Gm23284-201ENSMUST00000178069 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 n-R5s100-201ENSMUST00000178106 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 n-R5s111-201ENSMUST00000178203 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 n-R5s105-201ENSMUST00000178499 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 n-R5s149-201ENSMUST00000178520 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 n-R5s103-201ENSMUST00000178755 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 n-R5s123-201ENSMUST00000178804 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 n-R5s142-201ENSMUST00000178820 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 n-R5s144-201ENSMUST00000178859 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 n-R5s139-201ENSMUST00000178975 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 n-R5s134-201ENSMUST00000178983 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 n-R5s136-201ENSMUST00000179080 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 Gm25018-201ENSMUST00000179081 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 n-R5s104-201ENSMUST00000179107 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 n-R5s113-201ENSMUST00000179143 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 n-R5s133-201ENSMUST00000179275 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 n-R5s117-201ENSMUST00000179431 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 Gm25212-201ENSMUST00000179432 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 n-R5s138-201ENSMUST00000179476 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 n-R5s122-201ENSMUST00000179500 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 n-R5s143-201ENSMUST00000179542 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 n-R5s107-201ENSMUST00000179704 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 Gm26391-201ENSMUST00000179843 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 n-R5s110-201ENSMUST00000179995 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 n-R5s128-201ENSMUST00000180096 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 n-R5s124-201ENSMUST00000180334 119 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
PrkdcP97313 Gm24089-201ENSMUST00000093696 109 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC8.05□□□□□ -1.12
PrkdcP97313 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC8.05□□□□□ -1.12
PrkdcP97313 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
PrkdcP97313 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Gm9924-202ENSMUST00000192760 2311 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC8.05□□□□□ -1.12
PrkdcP97313 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 AC124356.1-201ENSMUST00000221469 698 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 Gm26035-201ENSMUST00000083065 308 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC8.05□□□□□ -1.12
PrkdcP97313 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
PrkdcP97313 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
PrkdcP97313 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Gm45266-201ENSMUST00000210111 2173 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
PrkdcP97313 Gm22661-201ENSMUST00000104192 132 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 Gm4294-201ENSMUST00000105169 614 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PrkdcP97313 Gm7741-201ENSMUST00000181445 989 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 Gm19927-201ENSMUST00000185792 781 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 Gm5254-201ENSMUST00000188353 977 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 Gm44917-201ENSMUST00000208798 520 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 Gm29689-201ENSMUST00000221076 589 ntBASIC8.05□□□□□ -1.12
PrkdcP97313 CT010480.2-201ENSMUST00000225424 737 ntBASIC8.05□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms