Protein–RNA interactions for Protein: P84444

Ccl21a, C-C motif chemokine 21a, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21aP84444 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.17□□□□□ -0.78
Ccl21aP84444 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.17□□□□□ -0.78
Ccl21aP84444 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Ccl21aP84444 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl21aP84444 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl21aP84444 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Ccl21aP84444 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC10.17□□□□□ -0.78
Ccl21aP84444 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl21aP84444 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl21aP84444 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl21aP84444 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl21aP84444 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl21aP84444 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl21aP84444 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl21aP84444 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Ccl21aP84444 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl21aP84444 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl21aP84444 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccl21aP84444 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ccl21aP84444 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Ccl21aP84444 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.16□□□□□ -0.78
Ccl21aP84444 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Gm5639-201ENSMUST00000122305 2403 ntBASIC10.16□□□□□ -0.78
Ccl21aP84444 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Ccl21aP84444 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Ccl21aP84444 Gm37844-201ENSMUST00000192473 4097 ntBASIC10.16□□□□□ -0.78
Ccl21aP84444 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Ccl21aP84444 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Gm42941-201ENSMUST00000200347 1321 ntBASIC10.16□□□□□ -0.78
Ccl21aP84444 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC10.16□□□□□ -0.78
Ccl21aP84444 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Ccl21aP84444 Gm25766-201ENSMUST00000104101 131 ntBASIC10.16□□□□□ -0.78
Ccl21aP84444 Gm14274-201ENSMUST00000117182 615 ntBASIC10.16□□□□□ -0.78
Ccl21aP84444 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.16□□□□□ -0.78
Ccl21aP84444 Gm12164-201ENSMUST00000121695 551 ntBASIC10.16□□□□□ -0.78
Ccl21aP84444 Gm12030-201ENSMUST00000121917 223 ntBASIC10.16□□□□□ -0.78
Ccl21aP84444 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC10.16□□□□□ -0.78
Ccl21aP84444 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.16□□□□□ -0.78
Ccl21aP84444 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC10.16□□□□□ -0.78
Ccl21aP84444 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Gm44506-201ENSMUST00000206278 965 ntBASIC10.16□□□□□ -0.78
Ccl21aP84444 Gm18460-201ENSMUST00000208088 464 ntBASIC10.16□□□□□ -0.78
Ccl21aP84444 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.16□□□□□ -0.78
Ccl21aP84444 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC10.16□□□□□ -0.78
Ccl21aP84444 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Ccl21aP84444 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Ccl21aP84444 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Ccl21aP84444 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Ccl21aP84444 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccl21aP84444 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl21aP84444 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC10.15□□□□□ -0.78
Ccl21aP84444 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl21aP84444 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl21aP84444 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl21aP84444 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl21aP84444 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl21aP84444 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl21aP84444 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl21aP84444 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl21aP84444 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl21aP84444 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl21aP84444 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl21aP84444 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl21aP84444 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl21aP84444 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl21aP84444 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.15□□□□□ -0.78
Ccl21aP84444 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl21aP84444 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl21aP84444 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Ccl21aP84444 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms