Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smad1P70340 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.66□□□□□ -0.38
Smad1P70340 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Smad1P70340 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smad1P70340 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smad1P70340 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smad1P70340 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smad1P70340 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smad1P70340 Gm16505-201ENSMUST00000179981 232 ntBASIC12.66□□□□□ -0.38
Smad1P70340 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.66□□□□□ -0.38
Smad1P70340 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smad1P70340 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smad1P70340 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Smad1P70340 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smad1P70340 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.66□□□□□ -0.38
Smad1P70340 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Smad1P70340 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smad1P70340 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smad1P70340 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smad1P70340 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smad1P70340 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smad1P70340 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smad1P70340 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smad1P70340 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.66□□□□□ -0.38
Smad1P70340 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smad1P70340 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smad1P70340 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.66□□□□□ -0.38
Smad1P70340 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
Smad1P70340 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smad1P70340 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Smad1P70340 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smad1P70340 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Smad1P70340 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Smad1P70340 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smad1P70340 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smad1P70340 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smad1P70340 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smad1P70340 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smad1P70340 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smad1P70340 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smad1P70340 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smad1P70340 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
Smad1P70340 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Smad1P70340 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smad1P70340 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smad1P70340 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smad1P70340 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smad1P70340 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smad1P70340 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.65□□□□□ -0.38
Smad1P70340 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.65□□□□□ -0.38
Smad1P70340 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smad1P70340 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smad1P70340 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smad1P70340 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.65□□□□□ -0.38
Smad1P70340 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.65□□□□□ -0.38
Smad1P70340 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smad1P70340 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.65□□□□□ -0.38
Smad1P70340 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.65□□□□□ -0.38
Smad1P70340 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.65□□□□□ -0.38
Smad1P70340 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.65□□□□□ -0.38
Smad1P70340 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.65□□□□□ -0.38
Smad1P70340 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smad1P70340 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Smad1P70340 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smad1P70340 Gm26035-201ENSMUST00000083065 308 ntBASIC12.65□□□□□ -0.38
Smad1P70340 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smad1P70340 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Smad1P70340 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smad1P70340 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smad1P70340 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Smad1P70340 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smad1P70340 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smad1P70340 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smad1P70340 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Smad1P70340 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Smad1P70340 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Smad1P70340 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Smad1P70340 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smad1P70340 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Smad1P70340 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.64□□□□□ -0.39
Smad1P70340 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smad1P70340 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Smad1P70340 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smad1P70340 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Smad1P70340 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smad1P70340 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smad1P70340 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smad1P70340 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smad1P70340 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.64□□□□□ -0.39
Smad1P70340 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Smad1P70340 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smad1P70340 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smad1P70340 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smad1P70340 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.64□□□□□ -0.39
Smad1P70340 Gm11222-201ENSMUST00000119005 738 ntBASIC12.64□□□□□ -0.39
Smad1P70340 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smad1P70340 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smad1P70340 Gm7809-201ENSMUST00000153199 742 ntBASIC12.64□□□□□ -0.39
Smad1P70340 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.64□□□□□ -0.39
Smad1P70340 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms