Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
GdnfP48540 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
GdnfP48540 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.79□□□□□ -0.68
GdnfP48540 Gm13813-201ENSMUST00000120998 787 ntBASIC10.79□□□□□ -0.68
GdnfP48540 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.79□□□□□ -0.68
GdnfP48540 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.79□□□□□ -0.68
GdnfP48540 Gm24644-201ENSMUST00000157114 139 ntBASIC10.79□□□□□ -0.68
GdnfP48540 Gm27331-201ENSMUST00000183705 60 ntBASIC10.79□□□□□ -0.68
GdnfP48540 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC10.79□□□□□ -0.68
GdnfP48540 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.79□□□□□ -0.68
GdnfP48540 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.79□□□□□ -0.68
GdnfP48540 Gm42442-201ENSMUST00000197951 1133 ntBASIC10.79□□□□□ -0.68
GdnfP48540 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.79□□□□□ -0.68
GdnfP48540 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.79□□□□□ -0.68
GdnfP48540 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.79□□□□□ -0.68
GdnfP48540 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.79□□□□□ -0.68
GdnfP48540 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.79□□□□□ -0.68
GdnfP48540 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
GdnfP48540 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
GdnfP48540 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
GdnfP48540 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
GdnfP48540 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
GdnfP48540 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
GdnfP48540 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
GdnfP48540 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
GdnfP48540 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
GdnfP48540 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
GdnfP48540 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.78□□□□□ -0.68
GdnfP48540 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.78□□□□□ -0.68
GdnfP48540 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
GdnfP48540 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.78□□□□□ -0.68
GdnfP48540 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
GdnfP48540 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.78□□□□□ -0.68
GdnfP48540 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.78□□□□□ -0.68
GdnfP48540 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.78□□□□□ -0.68
GdnfP48540 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.78□□□□□ -0.68
GdnfP48540 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
GdnfP48540 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.78□□□□□ -0.68
GdnfP48540 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
GdnfP48540 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
GdnfP48540 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
GdnfP48540 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
GdnfP48540 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.78□□□□□ -0.68
GdnfP48540 Gm18351-201ENSMUST00000188646 883 ntBASIC10.78□□□□□ -0.68
GdnfP48540 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.78□□□□□ -0.68
GdnfP48540 Gm37497-201ENSMUST00000195830 798 ntBASIC10.78□□□□□ -0.68
GdnfP48540 Gm42599-201ENSMUST00000201308 469 ntBASIC10.78□□□□□ -0.68
GdnfP48540 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.78□□□□□ -0.68
GdnfP48540 Gm29705-201ENSMUST00000212598 474 ntBASIC10.78□□□□□ -0.68
GdnfP48540 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
GdnfP48540 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
GdnfP48540 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
GdnfP48540 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
GdnfP48540 Gm10146-201ENSMUST00000072739 309 ntBASIC10.78□□□□□ -0.68
GdnfP48540 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
GdnfP48540 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
GdnfP48540 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
GdnfP48540 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
GdnfP48540 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
GdnfP48540 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.78□□□□□ -0.68
GdnfP48540 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
GdnfP48540 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
GdnfP48540 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
GdnfP48540 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.78□□□□□ -0.68
GdnfP48540 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
GdnfP48540 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
GdnfP48540 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.77□□□□□ -0.68
GdnfP48540 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.77□□□□□ -0.68
GdnfP48540 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
GdnfP48540 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
GdnfP48540 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.77□□□□□ -0.68
GdnfP48540 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
GdnfP48540 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
GdnfP48540 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.77□□□□□ -0.68
GdnfP48540 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
GdnfP48540 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
GdnfP48540 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
GdnfP48540 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
GdnfP48540 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
GdnfP48540 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.77□□□□□ -0.69
GdnfP48540 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
GdnfP48540 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms