Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gli1P47806 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.99□□□□□ -0.49
Gli1P47806 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gli1P47806 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Gli1P47806 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Gli1P47806 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.99□□□□□ -0.49
Gli1P47806 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.99□□□□□ -0.49
Gli1P47806 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gli1P47806 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gli1P47806 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gli1P47806 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gli1P47806 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Gli1P47806 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.99□□□□□ -0.49
Gli1P47806 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gli1P47806 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gli1P47806 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gli1P47806 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gli1P47806 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gli1P47806 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gli1P47806 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gli1P47806 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gli1P47806 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.98□□□□□ -0.49
Gli1P47806 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Gli1P47806 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.98□□□□□ -0.49
Gli1P47806 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Gm15370-201ENSMUST00000117158 253 ntBASIC11.98□□□□□ -0.49
Gli1P47806 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.98□□□□□ -0.49
Gli1P47806 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.98□□□□□ -0.49
Gli1P47806 Gm16379-201ENSMUST00000161469 348 ntBASIC11.98□□□□□ -0.49
Gli1P47806 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.98□□□□□ -0.49
Gli1P47806 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.98□□□□□ -0.49
Gli1P47806 Mir3547-201ENSMUST00000175461 88 ntBASIC11.98□□□□□ -0.49
Gli1P47806 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.98□□□□□ -0.49
Gli1P47806 Gm8762-201ENSMUST00000193486 339 ntBASIC11.98□□□□□ -0.49
Gli1P47806 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.98□□□□□ -0.49
Gli1P47806 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.98□□□□□ -0.49
Gli1P47806 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Gli1P47806 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.98□□□□□ -0.49
Gli1P47806 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Gli1P47806 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.98□□□□□ -0.49
Gli1P47806 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Gli1P47806 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gli1P47806 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.98□□□□□ -0.49
Gli1P47806 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gli1P47806 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.97□□□□□ -0.49
Gli1P47806 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.97□□□□□ -0.49
Gli1P47806 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.97□□□□□ -0.49
Gli1P47806 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.97□□□□□ -0.49
Gli1P47806 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gli1P47806 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Gli1P47806 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gli1P47806 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gli1P47806 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gli1P47806 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gli1P47806 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gli1P47806 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gli1P47806 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gli1P47806 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gli1P47806 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.97□□□□□ -0.49
Gli1P47806 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gli1P47806 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.97□□□□□ -0.49
Gli1P47806 Gm7029-201ENSMUST00000173226 450 ntBASIC11.97□□□□□ -0.49
Gli1P47806 Gm37489-201ENSMUST00000191883 159 ntBASIC11.97□□□□□ -0.49
Gli1P47806 Gm3786-201ENSMUST00000202659 378 ntBASIC11.97□□□□□ -0.49
Gli1P47806 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.97□□□□□ -0.49
Gli1P47806 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.97□□□□□ -0.49
Gli1P47806 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gli1P47806 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms