Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdx2P43241 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cdx2P43241 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdx2P43241 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdx2P43241 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdx2P43241 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdx2P43241 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdx2P43241 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdx2P43241 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdx2P43241 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdx2P43241 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdx2P43241 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdx2P43241 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdx2P43241 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdx2P43241 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdx2P43241 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdx2P43241 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdx2P43241 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdx2P43241 Gm23912-201ENSMUST00000104687 87 ntBASIC11.63□□□□□ -0.55
Cdx2P43241 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.63□□□□□ -0.55
Cdx2P43241 Gm11675-201ENSMUST00000121873 832 ntBASIC11.63□□□□□ -0.55
Cdx2P43241 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.63□□□□□ -0.55
Cdx2P43241 Gm23771-201ENSMUST00000178702 110 ntBASIC11.63□□□□□ -0.55
Cdx2P43241 Gm27910-201ENSMUST00000185004 107 ntBASIC11.63□□□□□ -0.55
Cdx2P43241 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdx2P43241 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.63□□□□□ -0.55
Cdx2P43241 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdx2P43241 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdx2P43241 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdx2P43241 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdx2P43241 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdx2P43241 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Cdx2P43241 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdx2P43241 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cdx2P43241 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Cdx2P43241 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdx2P43241 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.63□□□□□ -0.55
Cdx2P43241 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdx2P43241 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdx2P43241 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cdx2P43241 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Cdx2P43241 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cdx2P43241 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Cdx2P43241 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 Gm15566-201ENSMUST00000121130 590 ntBASIC11.62□□□□□ -0.55
Cdx2P43241 Gm13263-201ENSMUST00000121271 838 ntBASIC11.62□□□□□ -0.55
Cdx2P43241 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.62□□□□□ -0.55
Cdx2P43241 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.62□□□□□ -0.55
Cdx2P43241 Gm25072-201ENSMUST00000175233 235 ntBASIC11.62□□□□□ -0.55
Cdx2P43241 Gm23153-201ENSMUST00000175323 313 ntBASIC11.62□□□□□ -0.55
Cdx2P43241 Mir7076-201ENSMUST00000183519 74 ntBASIC11.62□□□□□ -0.55
Cdx2P43241 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.62□□□□□ -0.55
Cdx2P43241 Gm37905-201ENSMUST00000195310 341 ntBASIC11.62□□□□□ -0.55
Cdx2P43241 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.62□□□□□ -0.55
Cdx2P43241 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.62□□□□□ -0.55
Cdx2P43241 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.62□□□□□ -0.55
Cdx2P43241 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.62□□□□□ -0.55
Cdx2P43241 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.62□□□□□ -0.55
Cdx2P43241 Prrxl1-205ENSMUST00000228878 723 ntBASIC11.62□□□□□ -0.55
Cdx2P43241 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Cdx2P43241 Grk6-205ENSMUST00000224653 2976 ntBASIC11.62□□□□□ -0.55
Cdx2P43241 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.62□□□□□ -0.55
Cdx2P43241 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.62□□□□□ -0.55
Cdx2P43241 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.62□□□□□ -0.55
Cdx2P43241 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdx2P43241 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx2P43241 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx2P43241 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.61□□□□□ -0.55
Cdx2P43241 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx2P43241 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx2P43241 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx2P43241 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx2P43241 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx2P43241 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdx2P43241 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms