Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Nkx2-2P42586 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.23□□□□□ -0.61
Nkx2-2P42586 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.23□□□□□ -0.61
Nkx2-2P42586 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Gm8885-201ENSMUST00000189382 598 ntBASIC11.23□□□□□ -0.61
Nkx2-2P42586 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.23□□□□□ -0.61
Nkx2-2P42586 Gm35960-201ENSMUST00000202712 767 ntBASIC11.23□□□□□ -0.61
Nkx2-2P42586 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.23□□□□□ -0.61
Nkx2-2P42586 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.23□□□□□ -0.61
Nkx2-2P42586 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-2P42586 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Gm14109-201ENSMUST00000118814 309 ntBASIC11.22□□□□□ -0.61
Nkx2-2P42586 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.22□□□□□ -0.61
Nkx2-2P42586 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.22□□□□□ -0.61
Nkx2-2P42586 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.22□□□□□ -0.61
Nkx2-2P42586 Gm9230-201ENSMUST00000188228 532 ntBASIC11.22□□□□□ -0.61
Nkx2-2P42586 Gm38341-201ENSMUST00000195357 515 ntBASIC11.22□□□□□ -0.61
Nkx2-2P42586 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.22□□□□□ -0.61
Nkx2-2P42586 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-2P42586 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-2P42586 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Nkx2-2P42586 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-2P42586 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.21□□□□□ -0.61
Nkx2-2P42586 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.21□□□□□ -0.61
Nkx2-2P42586 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-2P42586 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.21□□□□□ -0.61
Nkx2-2P42586 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-2P42586 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-2P42586 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-2P42586 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-2P42586 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Nkx2-2P42586 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms