Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.34□□□□□ -0.43
Fen1P39749 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fen1P39749 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Fen1P39749 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fen1P39749 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fen1P39749 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fen1P39749 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fen1P39749 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Fen1P39749 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fen1P39749 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fen1P39749 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.34□□□□□ -0.43
Fen1P39749 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Fen1P39749 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.34□□□□□ -0.43
Fen1P39749 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.34□□□□□ -0.43
Fen1P39749 Gm13123-201ENSMUST00000122173 492 ntBASIC12.34□□□□□ -0.43
Fen1P39749 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.34□□□□□ -0.43
Fen1P39749 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fen1P39749 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fen1P39749 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fen1P39749 Gm26185-201ENSMUST00000157692 266 ntBASIC12.34□□□□□ -0.43
Fen1P39749 Gm17208-201ENSMUST00000168388 535 ntBASIC12.34□□□□□ -0.43
Fen1P39749 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fen1P39749 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.34□□□□□ -0.43
Fen1P39749 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.34□□□□□ -0.43
Fen1P39749 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Fen1P39749 Gm18062-201ENSMUST00000208020 547 ntBASIC12.34□□□□□ -0.43
Fen1P39749 Gm18055-201ENSMUST00000208254 547 ntBASIC12.34□□□□□ -0.43
Fen1P39749 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.34□□□□□ -0.43
Fen1P39749 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.34□□□□□ -0.43
Fen1P39749 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.34□□□□□ -0.43
Fen1P39749 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.34□□□□□ -0.43
Fen1P39749 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fen1P39749 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fen1P39749 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.34□□□□□ -0.43
Fen1P39749 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fen1P39749 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.34□□□□□ -0.43
Fen1P39749 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fen1P39749 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fen1P39749 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.34□□□□□ -0.43
Fen1P39749 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.34□□□□□ -0.43
Fen1P39749 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fen1P39749 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fen1P39749 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fen1P39749 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.34□□□□□ -0.43
Fen1P39749 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fen1P39749 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.34□□□□□ -0.43
Fen1P39749 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fen1P39749 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Fen1P39749 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Fen1P39749 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Fen1P39749 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.33□□□□□ -0.44
Fen1P39749 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.33□□□□□ -0.44
Fen1P39749 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.33□□□□□ -0.44
Fen1P39749 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Gm4984-201ENSMUST00000115987 360 ntBASIC12.33□□□□□ -0.44
Fen1P39749 Gm14760-201ENSMUST00000121831 999 ntBASIC12.33□□□□□ -0.44
Fen1P39749 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.33□□□□□ -0.44
Fen1P39749 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.33□□□□□ -0.44
Fen1P39749 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.33□□□□□ -0.44
Fen1P39749 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.33□□□□□ -0.44
Fen1P39749 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.33□□□□□ -0.44
Fen1P39749 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.33□□□□□ -0.44
Fen1P39749 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Fen1P39749 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Fen1P39749 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.33□□□□□ -0.44
Fen1P39749 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.33□□□□□ -0.44
Fen1P39749 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Fen1P39749 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fen1P39749 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fen1P39749 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fen1P39749 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Fen1P39749 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms