Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfc1P35601 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rfc1P35601 Gm44397-201ENSMUST00000195950 113 ntBASIC12.93□□□□□ -0.34
Rfc1P35601 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rfc1P35601 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfc1P35601 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.93□□□□□ -0.34
Rfc1P35601 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfc1P35601 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfc1P35601 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rfc1P35601 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rfc1P35601 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rfc1P35601 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rfc1P35601 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.93□□□□□ -0.34
Rfc1P35601 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rfc1P35601 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rfc1P35601 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfc1P35601 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rfc1P35601 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfc1P35601 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfc1P35601 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rfc1P35601 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfc1P35601 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfc1P35601 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rfc1P35601 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfc1P35601 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rfc1P35601 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfc1P35601 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Rfc1P35601 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rfc1P35601 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfc1P35601 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Rfc1P35601 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rfc1P35601 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rfc1P35601 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.92□□□□□ -0.34
Rfc1P35601 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rfc1P35601 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfc1P35601 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.92□□□□□ -0.34
Rfc1P35601 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.92□□□□□ -0.34
Rfc1P35601 Gm45668-201ENSMUST00000211271 493 ntBASIC12.92□□□□□ -0.34
Rfc1P35601 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.92□□□□□ -0.34
Rfc1P35601 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfc1P35601 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfc1P35601 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfc1P35601 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfc1P35601 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Rfc1P35601 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.92□□□□□ -0.34
Rfc1P35601 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rfc1P35601 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfc1P35601 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfc1P35601 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfc1P35601 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfc1P35601 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfc1P35601 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rfc1P35601 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.92□□□□□ -0.34
Rfc1P35601 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rfc1P35601 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rfc1P35601 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rfc1P35601 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Rfc1P35601 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Rfc1P35601 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfc1P35601 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rfc1P35601 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfc1P35601 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rfc1P35601 Gm14350-201ENSMUST00000116642 640 ntBASIC12.91□□□□□ -0.34
Rfc1P35601 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.91□□□□□ -0.34
Rfc1P35601 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.91□□□□□ -0.34
Rfc1P35601 Gm15429-201ENSMUST00000151268 798 ntBASIC12.91□□□□□ -0.34
Rfc1P35601 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfc1P35601 Gm6458-201ENSMUST00000211573 635 ntBASIC12.91□□□□□ -0.34
Rfc1P35601 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.91□□□□□ -0.34
Rfc1P35601 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfc1P35601 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.91□□□□□ -0.34
Rfc1P35601 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
Rfc1P35601 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfc1P35601 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfc1P35601 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rfc1P35601 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rfc1P35601 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfc1P35601 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.91□□□□□ -0.34
Rfc1P35601 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfc1P35601 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfc1P35601 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rfc1P35601 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfc1P35601 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rfc1P35601 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rfc1P35601 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Rfc1P35601 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfc1P35601 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfc1P35601 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rfc1P35601 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfc1P35601 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfc1P35601 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfc1P35601 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfc1P35601 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfc1P35601 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfc1P35601 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rfc1P35601 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.9□□□□□ -0.34
Rfc1P35601 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfc1P35601 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.9□□□□□ -0.34
Rfc1P35601 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.9□□□□□ -0.34
Rfc1P35601 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms