Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.33□□□□□ -0.6
Sftpa1P35242 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Sftpa1P35242 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sftpa1P35242 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sftpa1P35242 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Sftpa1P35242 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sftpa1P35242 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sftpa1P35242 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sftpa1P35242 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sftpa1P35242 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.32□□□□□ -0.6
Sftpa1P35242 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sftpa1P35242 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sftpa1P35242 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sftpa1P35242 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Sftpa1P35242 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Sftpa1P35242 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sftpa1P35242 Gm13047-201ENSMUST00000117116 815 ntBASIC11.32□□□□□ -0.6
Sftpa1P35242 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.32□□□□□ -0.6
Sftpa1P35242 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.32□□□□□ -0.6
Sftpa1P35242 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.32□□□□□ -0.6
Sftpa1P35242 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.32□□□□□ -0.6
Sftpa1P35242 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sftpa1P35242 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sftpa1P35242 Gm10731-201ENSMUST00000181171 448 ntBASIC11.32□□□□□ -0.6
Sftpa1P35242 Gm8343-201ENSMUST00000182705 994 ntBASIC11.32□□□□□ -0.6
Sftpa1P35242 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.32□□□□□ -0.6
Sftpa1P35242 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.32□□□□□ -0.6
Sftpa1P35242 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sftpa1P35242 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sftpa1P35242 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sftpa1P35242 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sftpa1P35242 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Sftpa1P35242 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sftpa1P35242 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sftpa1P35242 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Sftpa1P35242 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sftpa1P35242 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sftpa1P35242 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Sftpa1P35242 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sftpa1P35242 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sftpa1P35242 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sftpa1P35242 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sftpa1P35242 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sftpa1P35242 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Sftpa1P35242 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Sftpa1P35242 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Sftpa1P35242 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.31□□□□□ -0.6
Sftpa1P35242 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Sftpa1P35242 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.31□□□□□ -0.6
Sftpa1P35242 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.31□□□□□ -0.6
Sftpa1P35242 Gm11451-201ENSMUST00000118946 630 ntBASIC11.31□□□□□ -0.6
Sftpa1P35242 Gm1848-201ENSMUST00000120711 789 ntBASIC11.31□□□□□ -0.6
Sftpa1P35242 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.31□□□□□ -0.6
Sftpa1P35242 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.31□□□□□ -0.6
Sftpa1P35242 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 Gm37299-201ENSMUST00000193951 826 ntBASIC11.31□□□□□ -0.6
Sftpa1P35242 Gm44329-201ENSMUST00000197469 112 ntBASIC11.31□□□□□ -0.6
Sftpa1P35242 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Sftpa1P35242 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.31□□□□□ -0.6
Sftpa1P35242 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.31□□□□□ -0.6
Sftpa1P35242 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.31□□□□□ -0.6
Sftpa1P35242 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Sftpa1P35242 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Sftpa1P35242 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Sftpa1P35242 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.31□□□□□ -0.6
Sftpa1P35242 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sftpa1P35242 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms