Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cbx3P23198 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Cbx3P23198 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.17□□□□□ -0.62
Cbx3P23198 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cbx3P23198 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cbx3P23198 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cbx3P23198 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cbx3P23198 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cbx3P23198 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cbx3P23198 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cbx3P23198 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cbx3P23198 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cbx3P23198 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cbx3P23198 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cbx3P23198 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cbx3P23198 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cbx3P23198 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Cbx3P23198 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cbx3P23198 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cbx3P23198 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cbx3P23198 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cbx3P23198 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cbx3P23198 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.17□□□□□ -0.62
Cbx3P23198 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.17□□□□□ -0.62
Cbx3P23198 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cbx3P23198 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Cbx3P23198 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Cbx3P23198 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.16□□□□□ -0.62
Cbx3P23198 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.16□□□□□ -0.62
Cbx3P23198 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Cbx3P23198 Gm17837-201ENSMUST00000186435 985 ntBASIC11.16□□□□□ -0.62
Cbx3P23198 Gm19931-201ENSMUST00000198920 368 ntBASIC11.16□□□□□ -0.62
Cbx3P23198 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.16□□□□□ -0.62
Cbx3P23198 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.16□□□□□ -0.62
Cbx3P23198 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Cbx3P23198 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.16□□□□□ -0.62
Cbx3P23198 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cbx3P23198 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC11.16□□□□□ -0.62
Cbx3P23198 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Cbx3P23198 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.16□□□□□ -0.62
Cbx3P23198 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.16□□□□□ -0.62
Cbx3P23198 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC11.16□□□□□ -0.62
Cbx3P23198 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cbx3P23198 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Cbx3P23198 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cbx3P23198 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cbx3P23198 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cbx3P23198 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cbx3P23198 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cbx3P23198 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Cbx3P23198 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Cbx3P23198 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cbx3P23198 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cbx3P23198 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cbx3P23198 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cbx3P23198 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cbx3P23198 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cbx3P23198 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cbx3P23198 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cbx3P23198 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Cbx3P23198 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cbx3P23198 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.15□□□□□ -0.62
Cbx3P23198 Gm10766-202ENSMUST00000194123 606 ntBASIC11.15□□□□□ -0.62
Cbx3P23198 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.15□□□□□ -0.62
Cbx3P23198 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cbx3P23198 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cbx3P23198 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms